GENE NAME GWEIGHT Ross00_ACHN_CL9023_RENAL Ross00_TK_10_CL9024_RENAL Ross00_UO_31_CL9004_RENAL Ross00_RXF_393_CL9016_RENAL Ross00_786_0_CL9018_RENAL Ross00_A498_CL9013_RENAL Bhattacharjee01_AD-275t1-A95-3 Ross00_CAKI_1_CL9015_RENAL Ross00_OVCAR_3_CL6001_OVARIAN Ross00_U251_CL12009_CNS Ross00_SNB_19_CL12002_CNS Ross00_SF_295_CL12015_CNS Detweiler01_E2_U937_wild_type_2h Alizadeh00_DLCL_0013 Ross00_HOP_62_CL1026_NSCLC Ross00_LOXIMVI_CL10001_MELANOMA Garber01_248_97_LCLC Ross00_SN12C_CL9008_RENAL Ross00_OVCAR_8_CL6005_OVARIAN Ross00_ADR_RES_CL5002_UNKNOWN Ross00_NCI_H226_CL1013_NSCLC Staunton01_CNS_SNB75 Ross00_BT_549_CL5013_BREAST Ross00_SF_268_CL12014_CNS Chen02_HCC_HK23 Ross00_PC_3_CL11001_PROSTATE Pomeroy02_Brain_MGlio_7 Ross00_HOP_92_CL1029_NSCLC Alizadeh00_DLCL_0027_lc8n095 Alizadeh00_DLCL_0011 Ross00_EKVX_CL1008_NSCLC Ross00_A549_CL1004_NSCLC Shipp02_DLBC55 Garber01_139_97_LCLC Sorlie01_BC790 Alizadeh00_DLCL_0047 Ross00_DU_145_CL11003_PROSTATE Ross00_MDA_MB_231_CL5005_BREAST Perou00_HMEC_C_Confluent Perou00_HMEC_C_IFNalpha Ross01_HME31 Perou00_HMEC_C Perou00_184Aa Chen02_FNH_SF33 Chen02_Liver_SF33 Chen02_Liver_SF5 Chen02_Liver_HBV_HK18 Chen02_Liver_HBV_HK22 Chen02_Liver_HBV_HK19 Chen02_Liver_SF4 Iyer99_Serum_cyc_4_hours Chen02_HCC_SF4 Chen02_Liver_SF36 Chen02_Liver_HBV_HK62 Chen02_Liver_HBV_SF34 Blader01_Normal_labelling_expt Whitfield02_0_1hr_Hela_Double_Thymidine Detweiler01_E3_U937_mock_2hb Chen02_HCC_HBV_HK53 Garber01_185_96_Adeno Alizadeh00_DLCL_0007 Alizadeh00_DLCL_0007_lc4b028 Chen02_HCC_HBV_HK3 Chen02_HCC_HBV_HK58 Chen02_HCC_HBV_HK84 Chen02_HCC_HBV_HK54 Chen02_HCC_HBV_HK18 Chen02_HCC_HBV_HK20 Chen02_HCC_HBV_HK56 Chen02_HCC_HBV_HK19 Chen02_HCC_HCV_SF3 Chen02_HCC_HBV_HK24 Chen02_HCC_HBV_HK38 Ross00_SF_539_CL12016_CNS Chen02_Adenoma_SF25 Garber01_218_97_Adeno Chen02_HCC_HBV_HK21 Nutt03_Brain_CG_11 Chen02_HCC_HBV_HK48 Chen02_HCC_HBV_HK15 Chen02_HCC_HBV_HK57 Chen02_HCC_HBV_HK39 Chen02_HCC_HBV_HK27 Chen02_HCC_HBV_HK64_T7 Chen02_Met_Colon_Cancer_SF5 Chen02_Met_Colon_Cancer_SF10 Chen02_HCC_HBV_SF35_3 Chen02_HCC_HBV_SF35_1 Chen02_HCC_HBV_SF35_2 Chen02_HCC_HCV_SF30 Chen02_HCC_HBV_HK42 Chen02_HCC_HBV_HK14 Chen02_HCC_HBV_HK37 Alizadeh00_DLCL_0052_lc4b060 Sorlie01_BC805A_BE Chen02_HCC_HBV_HK65_T4 Chen02_HCC_HBV_HK4 Chen02_HCC_HK46 Chen02_HCC_HBV_HK86 Chen02_HCC_HBV_HK44 Chen02_HCC_HBV_HK67_T3 Chen02_HCC_HBV_HK67_T2 Garber01_246_97_SCC_c Garber01_42_95_SCC Garber01_239_97_SCC Garber01_314_99_SCLC Blader01_Reverse_labelling_expt_ Bhattacharjee01_SMCL-SMCL3t1-A290-10 Chen02_HCC_HK6 Sorlie01_BC214B_BE Perou00_BC214A_AF Sorlie01_BC23 Alizadeh00_OCI_Ly12 Chen02_HCC_HBV_HK13 Chen02_HCC_HBV_SF12 Chen02_Undifferentiated_Carcinoma_HK17 Garber01_299_99_Adeno Alizadeh00_U937 Alizadeh00_DLCL_0052 Sorlie01_BC2 Garber01_75_95_combined Garber01_161_96_Adeno Alizadeh00_DLCL_0017_lc4b031 Alizadeh00_DLCL_0021 Sorlie01_BC208A_BE Chen02_HCC_SF9 Alizadeh00_WSU1 Alizadeh00_OCI_Ly3 Bhattacharjee01_AD-296t21-A106-03 * Bhattacharjee01_AD-360t1-A176-A406 Whitfield02_34h_Thy_Noc_Exp4 Whitfield02_36h_Thy_Noc_Exp4 Alizadeh00_SUDHL6 Rosenwald01_JVM_HH Sorlie01_BC111B_BE Pomeroy02_Brain_Rhab_7 Pomeroy02_Brain_Rhab_9 Garber01_219_97_SCC Perou00_184A1_LATE Garber01_245_97_node Alizadeh00_OCI_Ly10_lc7b042 Alizadeh00_OCI_Ly10 Alizadeh00_OCI_Ly10_lc8n086 Sorlie01_BC120A_BE Sorlie01_BC713A_BE Sorlie01_BC205B_AF Pomeroy02_Brain_MD_52 Sorlie01_BC606B_AF Nutt03_Brain_CG_6 Alizadeh00_Jurkat Alizadeh00_OCI_Ly13_2 Sorlie01_BC115B_BE Bhattacharjee01_AD-131T1-A15-A200-1* Perou00_BT_549 Perou00_MDA_MB_231_NCI Ross01_MDA_MB_231_UTSW Ross01_HCC_1937 Bhattacharjee01_AD-186T1-A27-1 Garber01_256_97_LCLC Staunton01_RENAL_CAKI1 Garber01_191_96_Adeno Bhattacharjee01_AD-287t1-A101-3 Pomeroy02_Brain_MD_46 Nutt03_Brain_CG_4 Nutt03_Brain_CG_2 Nutt03_Brain_CG_8 Nutt03_Brain_CO_4 Whitfield02_0h_mitotic_selection Iyer99_Serum_08 Garber01_319_00MT2_Adeno Whitfield02_14h_Thy_Noc_Exp4 Whitfield02_16h_Thy_Noc_Exp4 Blader01_HFF_RNA_spiked_with_20_Toxo_RNA Boldrick02_Diversity_Dataset_Ionomycin_PMA_timecourse_12_0_hr Boldrick02_Diversity_Dataset_Ionomycin_PMA_timecourse_6_0_hr Cuadras02_Infection_3_RRVb_16h_vs_mocka_16h Iyer99_Unsynchronized Iyer99_Unsynchronized_cyc Iyer99_Serum_20 Iyer99_Serum_24 Lessnick02_Run 2, Day 1 Lessnick02_Run 1, Day 1 Lessnick02_Run 2, Day 0 Whitfield02_8_hr_Hela_Double_Thymidine Whitfield02_6hr_Hela_Double_Thymidine Whitfield02_10_hr_Hela_Double_Thymidine Whitfield02_2_hr_Hela_Double_Thymidine_exp3 Whitfield02_1_hr_Hela_Double_Thymidine_exp3 Whitfield02_10h_Thy_Noc_Exp4 Whitfield02_6_hr_Hela_Double_Thymidine_exp3 Whitfield02_7_hr_Hela_Double_Thymidine_exp3 Whitfield02_8_hr_Hela_Double_Thymidine_exp3 Singh02_T60__tumor Singh02_T31__tumor Singh02_T55__tumor Singh02_T36__tumor Singh02_N38__normal Singh02_T62__tumor Singh02_T10__tumor Singh02_N62__normal Singh02_N61__normal Singh02_N01__normal Singh02_N31__normal Singh02_N36__normal Singh02_N60__normal Shipp02_DLBC38 Pomeroy02_Brain_Rhab_3 Ross01_HB2 Pomeroy02_Brain_Rhab_1 Pomeroy02_Brain_Rhab_5 Pomeroy02_Brain_Rhab_4 Pomeroy02_Brain_Rhab_2 Shipp02_DLBC13 Shipp02_DLBC46 Chen02_Hep40_cells Chen02_HepG2_cells Chen02_SNU398_cells Detweiler01_E6_U937_wild_type_2hb Armstrong01_ALL_2 Golub99_ALL_20185_B-cell Golub99_ALL 1101 TA- ML Norel Detweiler01_E6_U937_phoP_0_5h Detweiler01_E6_U937_mock_4h Staunton01_MELAN_M14 Staunton01_MELAN_SKMEL5 Pomeroy02_Brain_MD_14 Pomeroy02_Brain_MD_22 Nutt03_Brain_CO_1 Nutt03_Brain_CG_5 Nutt03_Brain_CG_12 Nutt03_Brain_NG_13 Chen02_SK_HEP_1_cells Chen02_SNU423_cells Chen02_SNU475_cells Chen02_SNU182_cells Chen02_SNU449_cells Chen02_Hep3B_cells Chen02_SNU387_cells Ramaswamy01_Normal__Uterus_UT_3 Ross01_HMS32 Ramaswamy01_Tumor__CNS_Glioblastoma_GlioB_7 Ross01_BJ_hTERT_PD210_Fibroblasts_UTSW Chen02_Synovial_Cell_Sarcoma_SF14 Nutt03_Brain_CG_14 Nutt03_Brain_CG_3 Pomeroy02_Brain_MGlio_8 Perou00_Hs578T_NCI Ross01_Hs578T_ATCC Ross00_HS_578T_CL5006_BREAST Perou00_HUVEC Perou00_HMVEC Shipp02_DLBC34 Shipp02_DLBC22 Shipp02_DLBC31 Ramaswamy01_Tumor__Pancreas_Adeno_Pan_4T Ramaswamy01_Tumor__Pancreas_Adeno_Pan_29T Ramaswamy01_Normal__Bladder_BL_5 Ramaswamy01_Normal__Colon_CR_4 Ramaswamy01_Normal__Prostate_PR_7 Ramaswamy01_Normal__Breast_BR_3 Ramaswamy01_Normal__Breast_BR_2 Detweiler01_E6_U937_wild_type_0_5h Ramaswamy01_Tumor__Mesothelioma_169_T7 Ramaswamy01_Tumor__Mesothelioma_165_T5 Ramaswamy01_Tumor__Colorectal_Adeno_95_I_057 Sorlie01_BC48_0 Shipp02_DLBC51 Shipp02_DLBC10 Ramaswamy01_Tumor__Lung_Adeno_LT14 Ramaswamy01_Tumor__Ovary_Adeno_HCTN_0002c011N Detweiler01_E2_U937_mock_2h Detweiler01_E6_U937_wild_type_2h Detweiler01_E6_U937_phoP_2h Detweiler01_E6_U937_phoP_3h Detweiler01_E6_U937_wild_type_4h Detweiler01_E6_U937_phoP_4h Detweiler01_E6_U937_wild_type_3h Detweiler01_E6_U937_mock_3hr Detweiler01_E6_U937_wild_type_1h Detweiler01_E6_U937_phoP_1h Detweiler01_E6_U937_mock_1h Detweiler01_E6_U937_mock_2h Detweiler01_E2_U937_wild_type_1hb Detweiler01_E2_U937_mock_1h Detweiler01_E2_U937_wild_type_1ha Detweiler01_E2_U937_wild_type_30m Detweiler01_E1_U937_wild_type_30m Detweiler01_E1_U937_mock_30m Detweiler01_E1_U937_mock_4h Boldrick02_U937_Dataset_Bp537_timecourse_1hr Boldrick02_U937_Dataset_BpTox6_timecourse_2_hr Boldrick02_U937_Dataset_BpTox6_timecourse_4_hr Boldrick02_U937_Dataset_BpTox6_timecourse_6_hr Boldrick02_U937_Dataset_BpTox6_timecourse_0_5_hr Boldrick02_U937_Dataset_BpTox6_timecourse_0_hr Boldrick02_U937_Dataset_BpTox6_timecourse_1_hr Boldrick02_U937_Dataset_Bp338_timecourse_4_0_hr Boldrick02_U937_Dataset_Bp338_timecourse_6_0_hr Boldrick02_U937_Dataset_BpA2_6_timecourse_4_0_hr Boldrick02_U937_Dataset_BpA2_6_timecourse_6_0_hr Perou00_SW872 Boldrick02_U937_Dataset_Bp537_timecourse_2_0hr Boldrick02_U937_Dataset_Bp537_timecourse_0hr Boldrick02_U937_Dataset_Bp537_timecourse_0_5hr Boldrick02_U937_Dataset_Bp537_timecourse_4hr Boldrick02_U937_Dataset_Bp537_timecourse_6hr Sorlie01_BC406A_2ndTUMOR Boldrick02_U937_Dataset_Bp338_timecourse_0_0_hr Boldrick02_U937_Dataset_Bp338_timecourse_1_0_hr Boldrick02_U937_Dataset_Bp338_timecourse_0_5_hr Boldrick02_U937_Dataset_Bp338_timecourse_2_0_hr Boldrick02_U937_Dataset_BpA2_6_timecourse_0_0_hr Boldrick02_U937_Dataset_BpA2_6_timecourse_0_5_hr Boldrick02_U937_Dataset_BpA2_6_timecourse_1_0_hr Boldrick02_U937_Dataset_BpA2_6_timecourse_2_0_hr Boldrick02_U937_Dataset_Uninfected_timecourse_4_0_hr Boldrick02_U937_Dataset_Uninfected_timecourse_0_5_hr Boldrick02_U937_Dataset_Uninfected_timecourse_6_0_hr Boldrick02_U937_Dataset_Uninfected_timecourse_2_0_hr Boldrick02_U937_Dataset_Uninfected_timecourse_0_0_hr Boldrick02_U937_Dataset_Uninfected_timecourse_1_0_hr Golub99_ALL_9335_B-cell Golub99_ALL_23953_B-cell Golub99_ALL_9186_T-cell Golub99_ALL_R23_B-cell Golub99_ALL R28 ML Relap Golub99_ALL_9692_B-cell Golub99_ALL_7092_B-cell Golub99_ALL_R11_B-cell Golub99_ALL_17929_B-cell Golub99_ALL SH 12 Golub99_ALL 406 TA ML Norel Golub99_ALL 19769 TA Norel Golub99_ALL 1275 TA ML Norel Golub99_ALL_20414_B-cell Golub99_ALL_16415_T-cell Golub99_ALL_5982_B-cell Golub99_ALL_17638_T-cell Golub99_ALL_19881_T-cell Golub99_ALL 1319 TA- ML Norel Golub99_ALL_21302_B-cell Armstrong01_ALL_13 Shipp02_DLBC56 Shipp02_FSCC3 Shipp02_FSCC5 Shipp02_DLBC28 Shipp02_FSCC9 Shipp02_FSCC8 Shipp02_FSCC7 Shipp02_FSCC10 Shipp02_FSCC18 Shipp02_FSCC17 Bhattacharjee01_AD-356t1-A175-4 Shipp02_FSCC6 Shipp02_FSCC12 Shipp02_DLBC14 Shipp02_DLBC54 Shipp02_DLBC32 Shipp02_DLBC47 Shipp02_DLBC11 Chen02_Met_Colon_Cancer_SF38 Golub99_AML 17 ML Golub99_AML_13 Golub99_AML_12 Golub99_AML 12 ML Golub99_AML SH 13 Golub99_ALL 4466 Norel Golub99_AML SH 14 Golub99_AML SH 18 Golub99_AML 15 PK Norel Armstrong01_AML_25 Golub99_AML 9 PK Relap Golub99_AML 10 PK Relap Golub99_AML_16 Golub99_AML 11 ML Golub99_AML 5 ML Relap Golub99_ALL_14749_B-cell Golub99_AML_7 Golub99_ALL_18239_B-cell Golub99_ALL 1457 ML Golub99_ALL 1256 TA ML Norel Golub99_ALL 522 TA- ML Norel Golub99_AML_20 Golub99_AML 19 PK Norel Armstrong01_AML_23 Armstrong01_AML_24 Armstrong01_AML_26 Armstrong01_AML_28 Armstrong01_AML_5 Armstrong01_AML_14 Armstrong01_AML_15 Armstrong01_ALL_3 Shipp02_DLBC27 Shipp02_DLBC35 Shipp02_FSCC16 Shipp02_FSCC11 Shipp02_FSCC14 Shipp02_FSCC19 Shipp02_DLBC26 Shipp02_FSCC15 Shipp02_DLBC39 Shipp02_DLBC15 Shipp02_DLBC21 Shipp02_FSCC1 Shipp02_DLBC29 Ramaswamy01_Normal__Whole_Brain_BRAIN_5 Ramaswamy01_Tumor__CNS_Glioblastoma_GlioB_9 Ramaswamy01_Tumor__CNS_Glioblastoma_GlioB_3 Ramaswamy01_Normal__Cerebellum_Brain_Ncer_NCB1 Ramaswamy01_Tumor__CNS_Medulloblastoma_M20_A56 Ramaswamy01_Tumor__CNS_Medulloblastoma_M06_D92 Ramaswamy01_Tumor__CNS_Medulloblastoma_M29_A91 Ramaswamy01_Tumor__CNS_Medulloblastoma_M42_A10 Chen02_Endometrial_Stromal_Sarcoma_SF26 Ramaswamy01_Normal__Cerebellum_Brain_Ncer_S-125 Ramaswamy01_Normal__Cerebellum_Brain_Ncer_S-51 Ramaswamy01_Tumor__Leukemia_ALL-T_ALL_ 22474 _BM Ramaswamy01_Tumor__Leukemia_ALL-T_ALL_ 9186 _BM Ramaswamy01_Tumor__Leukemia_ALL-B_ALL_ 9335 _BM Ramaswamy01_Tumor__Leukemia_AML_AML_ 5,PK _BM Ramaswamy01_Tumor__Leukemia_ALL-B_ALL_ 9692 _BM Ramaswamy01_Tumor__Leukemia_ALL-B_ALL_ 14749 _BM Ramaswamy01_Tumor__Leukemia_AML_AML_ 13,PK _BM Ramaswamy01_Tumor__Leukemia_ALL-T_ALL_ 17269 _BM Ramaswamy01_Tumor__Colorectal_Adeno_mCRT1_ 8936 Ramaswamy01_Tumor__Pancreas_Adeno_97_I_077 Ramaswamy01_Tumor__Bladder_TCC_B_0004 Ramaswamy01_Tumor__Renal_Carcinoma_Carc_623TO Ramaswamy01_Tumor__Renal_Carcinoma_6727 Ramaswamy01_Tumor__CNS_Glioblastoma_GlioB_2 Ramaswamy01_Normal__Kidney_KT_1 Ramaswamy01_Tumor__Lymphoma_Follicular_FSCC_S99_9100 Ramaswamy01_Normal__Kidney_Norm_622NO Ramaswamy01_Normal__Ovary_OV_2 Ramaswamy01_Normal__Bladder_BL_2 Ramaswamy01_Normal__Lung_LU_6 Ramaswamy01_Normal__Bladder_BL_6 Ramaswamy01_Normal__Prostate_PR_5 Ramaswamy01_Normal__Prostate_95_I_255 Armstrong01_MLL_9 Ramaswamy01_Normal__Kidney_KT_3 Ramaswamy01_Normal__Kidney_KT_6 Ramaswamy01_Normal__Kidney_Norm_627 Ramaswamy01_Tumor__Prostate_Adeno_P_0030 Chen02_HCC_HCV_SF24 Ramaswamy01_Tumor__Ovary_Adeno_0001c086 Ramaswamy01_Tumor__Renal_Carcinoma_Carc_623TS Ramaswamy01_Tumor__Renal_Carcinoma_Carc_614TS Ramaswamy01_Normal__Kidney_Norm_627NS Ramaswamy01_Normal__Kidney_Norm_613NO Ramaswamy01_Tumor__Renal_Carcinoma_Carc_628TG Ramaswamy01_Tumor__Lymphoma_Follicular_FSCC_S98_11020 Ramaswamy01_Tumor__Lymphoma_Follicular_FSCC_S98_5894 Ramaswamy01_Normal__Germinal_Center_GC38 Ramaswamy01_Normal__Peripheral_Blood_Poly_POLY3 Ramaswamy01_Tumor__Lymphoma_Follicular_FSCC_S93_23356 Ramaswamy01_Tumor__Lymphoma_Follicular_FSCC_S93_20082 Ramaswamy01_Tumor__Lymphoma_Follicular_FSCC_S93_13188 Ramaswamy01_Tumor__Lymphoma_Follicular_FSCC_S98_14359 Ramaswamy01_Tumor__Lymphoma_Large_B-Cell_L_B_CELL_S93_20626_Y Ramaswamy01_Tumor__Lymphoma_Large_B-Cell_L_B_CELL_S98_1217_R Ramaswamy01_Tumor__Lymphoma_Follicular_FSCC_S98_10416 Ramaswamy01_Tumor__Lymphoma_Large_B-Cell_L_B_CELL_S98_12569_R Ramaswamy01_Tumor__Lymphoma_Large_B-Cell_L_B_CELL_S98_17557_R Ramaswamy01_Tumor__Lymphoma_Follicular_FSCC_S93_14386 Ramaswamy01_Tumor__Lymphoma_Large_B-Cell_L_B_CELL_S98_8825_Y Detweiler01_E3_U937_mock_0_5h Detweiler01_E3_U937_mock_0_5hb Singh02_N21__normal Singh02_N15__normal Singh02_N05__normal Singh02_N03__normal Singh02_N04__normal Singh02_T15__tumor Singh02_T11__tumor Singh02_N45__normal Singh02_N18__normal Singh02_T34__tumor Singh02_N43__normal Singh02_N14__normal Singh02_T39__tumor Singh02_N30__normal Singh02_T06__tumor Singh02_T22__tumor Singh02_T33__tumor Singh02_N28__normal Singh02_N27__normal Singh02_T03__tumor Singh02_T20__tumor Singh02_T23__tumor Singh02_T24__tumor Singh02_N10__normal Singh02_N34__normal Singh02_T13__tumor Singh02_T19__tumor Singh02_T18__tumor Singh02_T05__tumor Singh02_T02__tumor Singh02_T26__tumor Singh02_T21__tumor Singh02_N06__normal Singh02_T49__tumor Singh02_N23__normal Singh02_N19__normal Singh02_N13__normal Singh02_N02__normal Singh02_N26__normal Singh02_N17__normal Singh02_N20__normal Singh02_N11__normal Singh02_T17__tumor Singh02_N35__normal Singh02_N50__normal Ross01_BT474_Stanford Pollack99_HMEC_X_BT474_sva117_sf Shipp02_DLBC24 Ross01_MCF7_UCLA Ross00_NCI_H23_CL1001_NSCLC Staunton01_NSCLC_NCIH23 Ross00_NCI_H522_CL1003_NSCLC Staunton01_NSCLC_NCIH522 Alizadeh00_Blood_B_cells_anti_IgM_IL_4_24h Alizadeh00_Blood_B_cells_anti_IgM_24h Ross00_T_47D_CL5014_BREAST Staunton01_BREAST_T47D Ross00_MCF7_CL5001_BREAST Ross00_MCF7A_repro Ross00_MCF7D_repro Ross00_SK_MEL_5_CL10007_MELANOMA Staunton01_MELAN_SKMEL28 Ross00_UACC_257CL10021_MELANOMA Staunton01_MELAN_UACC257 Staunton01_MELAN_MALME3M Ross00_HL_60_CL7008_LEUKEMIA Nutt03_Brain_CG_9 Ross00_RPMI_8226_CL7010_LEUKEMIA Staunton01_LEUK_K562 Ross00_MOLT_4_CL7006_LEUKEMIA Ross00_CCRF_CEM_CL7003_LEUKEMIA Ross00_K562A_repro Ross00_K562B_repro Ross00_K_562_CL7005_LEUKEMIA Ross00_COLO205_CL4010_COLON Staunton01_COLON_COLO205 Staunton01_COLON_SW620 Staunton01_LEUK_CCRFCEM Staunton01_LEUK_HL60 Staunton01_LEUK_MOLT4 Staunton01_LEUK_RPMI8266 Armstrong01_MLL__4 Staunton01_COLON_HCT15 Staunton01_COLON_KM12 Staunton01_COLON_HCC-2998 Staunton01_BREAST_MCF7 Staunton01_NSCLC_H460 Staunton01_OVAR_OVCAR3 Staunton01_NSCLC_NCIH332M Chen02_HCC_HK2 Staunton01_LEUK_SR Bhattacharjee01_AD-320t1-A272-10 Garber01_234_97_Adeno Chen02_HCC_HBV_CH2 Garber01_11_00_Adeno Sorlie01_BC14 Bhattacharjee01_AD-228t2-A152-4 * Sorlie01_BC1257 Bhattacharjee01_AD-218t1-A147-4 Chen02_HCC_HBV_HK63_T1 Chen02_HCC_HBV_HK63_T2 Chen02_HCC_HBV_HK65_T1 Staunton01_OVAR_OVCAR5 Pomeroy02_Brain_MD_25 Ross00_HT_29_CL4001_COLON Ross00_SR_CL7019_LEUKEMIA Sorlie01_BC125A_BE Sorlie01_BC18 Pomeroy02_Brain_MD_2 Ross00_SW_620_CL4009_COLON Pomeroy02_Brain_MD_37 Pomeroy02_Brain_MD_38 Chen02_HCC_HBV_SF15 Chen02_HCC_HBV_HK5 Chen02_HCC_HBV_SF18 Chen02_HCC_HBV_SF17 Chen02_HCC_HBV_HK7 Bhattacharjee01_SMCL-301-A306-5 Bhattacharjee01_SMCL-5937-A307-5 Bhattacharjee01_SQ-SQ10t1-A362-6 Bhattacharjee01_SQ-2572-A321-5 Garber01_315_99_SCLC Garber01_315_99_node Bhattacharjee01_COID-COID7t1-A344-6 Bhattacharjee01_COID-COID14t1-A351-6 Bhattacharjee01_COID-COID16t1-A352-6 Bhattacharjee01_COID-COID8t1-A345-6 Bhattacharjee01_COID-COID5t1-A342-6 Bhattacharjee01_COID-COID10t1-A347-6 Bhattacharjee01_COID-COID13t1-A350-6 Bhattacharjee01_COID-4385-A301-5 Bhattacharjee01_COID-COID12t1-A349-6 Bhattacharjee01_COID-1429-A303-5 Bhattacharjee01_COID-COID3t1-A340-6 Bhattacharjee01_COID-3580-A302-5 Bhattacharjee01_COID-COID18t1-A353-6 Bhattacharjee01_COID-COID9t1-A346-6 Bhattacharjee01_COID-COID4t1-A341-6 Bhattacharjee01_COID-COID11t1-A348-6 Bhattacharjee01_COID-COID6t1-A343-6 Pomeroy02_Brain_MGlio_5 Pomeroy02_Brain_MD_5 Pomeroy02_Brain_MGlio_6 Sorlie01_Normal_Breast_Norway1 Pomeroy02_Brain_MGlio_9 Pomeroy02_Brain_MGlio_4 Sorlie01_BC210B_AF Pomeroy02_Brain_MGlio_10 Pomeroy02_Brain_MGlio_1 Pomeroy02_Brain_MD_26 Pomeroy02_Brain_MGlio_3 Pomeroy02_Brain_MGlio_2 Pomeroy02_Brain_Ncer_3 Pomeroy02_Brain_Ncer_4 Pomeroy02_Brain_Ncer_2 Pomeroy02_Brain_MD_32 Pomeroy02_Brain_MD_19 Pomeroy02_Brain_MD_15 Chen02_HCC_HBV_HK65_T2 Pomeroy02_Brain_MD_58 Pomeroy02_Brain_PNET_6 Pomeroy02_Brain_MD_17 Alizadeh00_CLL_60_lc4b069 Alizadeh00_CLL_71 Pomeroy02_Brain_MD_33 Pomeroy02_Brain_Rhab_10 Sorlie01_BC104A_BE Chen02_Met_Colon_Carcinoid_SF11 Pomeroy02_Brain_MD_21 Rosenwald01_CLL_46 Pomeroy02_Brain_Ncer_1 Pomeroy02_Brain_MD_41 Pomeroy02_Brain_MD_31 Pomeroy02_Brain_MD_20 Pomeroy02_Brain_MD_29 Pomeroy02_Brain_MD_43 Pomeroy02_Brain_MD_8 Pomeroy02_Brain_MD_50 Pomeroy02_Brain_MD_45 Pomeroy02_Brain_MD_39 Pomeroy02_Brain_MD_30 Pomeroy02_Brain_MD_49 Pomeroy02_Brain_PNET_3 Pomeroy02_Brain_MD_10 Pomeroy02_Brain_MD_35 Pomeroy02_Brain_MD_4 Pomeroy02_Brain_MD_55 Pomeroy02_Brain_MD_44 Pomeroy02_Brain_MD_47 Pomeroy02_Brain_MD_24 Pomeroy02_Brain_MD_13 Pomeroy02_Brain_MD_36 Pomeroy02_Brain_PNET_5 Pomeroy02_Brain_MD_18 Pomeroy02_Brain_MD_42 Pomeroy02_Brain_MD_7 Pomeroy02_Brain_MD_3 Pomeroy02_Brain_MD_53 Pomeroy02_Brain_MD_16 Pomeroy02_Brain_MD_6 Pomeroy02_Brain_MD_11 Pomeroy02_Brain_PNET_1 Pomeroy02_Brain_MD_40 Pomeroy02_Brain_MD_60 Pomeroy02_Brain_MD_23 Pomeroy02_Brain_MD_56 Nutt03_Brain_NG_11 Nutt03_Brain_NG_14 Nutt03_Brain_CG_13 Nutt03_Brain_CG_10 Nutt03_Brain_NG_9 Nutt03_Brain_NO_13 Nutt03_Brain_NO_8 Nutt03_Brain_NO_11 Nutt03_Brain_NO_15 Nutt03_Brain_NO_9 Nutt03_Brain_NO_5 Nutt03_Brain_NG_2 Nutt03_Brain_NO_12 Nutt03_Brain_NO_6 Detweiler01_E3_U937_wild_type_2h Detweiler01_E3_U937_mock_4h Detweiler01_E3_U937_wild_type_1hb Detweiler01_E3_U937_wild_type_4h Detweiler01_E3_U937_phoP_2hc Detweiler01_E3_U937_mock_1hc Detweiler01_E3_U937_phoP_0_5ha Detweiler01_E3_U937_wild_type_0_5h Detweiler01_E3_U937_mock_1hb Detweiler01_E3_U937_wild_type_4hb Detweiler01_E3_U937_phoP_4hb Detweiler01_E3_U937_wild_type_2hb Detweiler01_E3_U937_mock_4hb Detweiler01_E3_U937_wild_type_1hc Detweiler01_E3_U937_phoP_0_5hb Detweiler01_E3_U937_wild_type_0_5hb Chen02_Liver_HBV_HK28 Chen02_Liver_HBV_HK30 Chen02_Liver_HK41 Chen02_Adenoma_HK73 Chen02_Liver_HK2 Chen02_Liver_HBV_HK14 Chen02_Liver_HBV_HK38 Chen02_Liver_SF9 Chen02_Liver_SF8 Chen02_Liver_SF16 Boldrick02_Dose_Response_Dataset_Bp338_10X_dose_timecourse_4_0hr Chen02_Liver_SF19 Chen02_Liver_HBV_HK4 Chen02_Liver_HBV_HK15 Chen02_Liver_HBV_HK11 Chen02_Liver_HCV_SF30 Chen02_Liver_HCV_SF29_S1 Chen02_Liver_HCV_SF29_S2 Lessnick02_Run 2, Day 2 Lessnick02_Run 1, Day 2 Lessnick02_Run 1, Day 3 Lessnick02_Run 1, Day 4 Whitfield02_4h_mitotic_selection Whitfield02_6h_mitotic_selection Whitfield02_2h_mitotic_selection Whitfield02_12h_mitotic_selection Whitfield02_14h_mitotic_selection Boldrick02_Dose_Response_Dataset_S_aureus_10X_dose_timecourse_12_0hr Boldrick02_Dose_Response_Dataset_Untreated_timecourse_2_0hr Boldrick02_Dose_Response_Dataset_Untreated_timecourse_0_5hr Boldrick02_Dose_Response_Dataset_Untreated_timecourse_0_0hr Bhattacharjee01_AD-311t1-A266-10 * Bhattacharjee01_AD-122t3-A197-8 Boldrick02_Dose_Response_Dataset_Bp338_1000X_dose_timecourse_0_5hr Boldrick02_Dose_Response_Dataset_Bp_LPS_0_01ug_ml_timecourse_2_0hr Boldrick02_Dose_Response_Dataset_Bp338_1X_dose_timecourse_2_0hr Boldrick02_Dose_Response_Dataset_Bp_LPS_0_1ug_ml_timecourse_6_0hr Boldrick02_Dose_Response_Dataset_Bp338_1X_dose_timecourse_6_0hr Boldrick02_Dose_Response_Dataset_Bp338_1X_dose_timecourse_4_0hr Boldrick02_Dose_Response_Dataset_Bp338_100X_dose_timecourse_0_0hr Boldrick02_Dose_Response_Dataset_S_aureus_100X_dose_timecourse_0_0hr Boldrick02_Dose_Response_Dataset_Untreated_timecourse_1_0hr Boldrick02_Dose_Response_Dataset_Bp_LPS_0_01ug_ml_timecourse_4_0hr Boldrick02_Dose_Response_Dataset_Bp_LPS_0_01ug_ml_timecourse_12_0hr Boldrick02_Dose_Response_Dataset_Untreated_timecourse_12_0hr Blader01_HFF_infected_with_PDS_tachyzoites_14_hours_duplicate_1 Blader01_HFF_infected_with_PDS_tachyzoites_14_hours_duplicate_2 Blader01_HFF_infected_with_PDS_tacyzoites_24_hour Garber01_156_96_Adeno Perou00_BC118A_AF Sorlie01_BC31_0 Rosenwald01_CLL_22 Chen02_Liver_HBV_HK10_S2 Chen02_Liver_HBV_HK10 Perou00_BC402B_AF Perou00_BC709A_AF Alizadeh00_FL_6_CD19_ Garber01_199_97_Adeno_c Perou00_BC808A_AF Alizadeh00_CLL_52_lc7b069 Alizadeh00_CLL_14_lc8n118 Perou00_BC710B_AF Ross00_OVCAR_4_CL6002_OVARIAN Rosenwald01_CLL_65 Alizadeh00_CLL_65_ Garber01_320_00_Adeno_c Alizadeh00_CLL_51_lc8n119 Alizadeh00_CLL_44_ Alizadeh00_CLL_9_lc8n115 Rosenwald01_CLL_17 Rosenwald01_CLL_21 Rosenwald01_CLL_61 Rosenwald01_CLL_53 Rosenwald01_CLL_49 Rosenwald01_CLL_58 Rosenwald01_CLL_10 Rosenwald01_CLL_19 Rosenwald01_CLL_60 Rosenwald01_CLL_24 Rosenwald01_CLL_16 Ross00_KM12_CL4017_COLON Ross00_HCC_2998_CL4002_COLON Sorlie01_BC1369 Ross00_HCT_15_CL4015_COLON Ross00_HCT_116_CL4003_COLON Ross00_IGROV1_CL6010_OVARIAN Boldrick02_Diversity_Dataset_Bp_LPS_timecourse_12_0_hr Boldrick02_Diversity_Dataset_Bp_Minnesota1_timecourse_24_0_hr Boldrick02_Diversity_Dataset_Bp_Minnesota1_timecourse_6_0_hr Whitfield02_8_hr_Hela_Double_Thymidine_exp2 Iyer99_Serum_0 Whitfield02_44_hr_Hela_Double_Thymidine_exp2 Chen02_HCC_HBV_HK64_T4 Chen02_HCC_HBV_HK64_T2 Chen02_HCC_HBV_HK64_T6 Chen02_HCC_HBV_HK64_T5 Bhattacharjee01_AD-185t2-A232-8 Bhattacharjee01_AD-334t1 d dup -A221-8 * Bhattacharjee01_AD-332t1-A220-8 Bhattacharjee01_AD-368t2-A285-10 Bhattacharjee01_AD-178T2-A22-1 * Bhattacharjee01_AD-224t1-A149-4 Garber01_306_99_Adeno Garber01_306_99_node Nutt03_Brain_NO_2 Nutt03_Brain_NO_10 Nutt03_Brain_NG_6 Nutt03_Brain_CG_7 Rosenwald01_CLL_52 Rosenwald01_CLL_48 Alizadeh00_CLL_39_lc7b070 Nutt03_Brain_NO_1 Nutt03_Brain_CO_7 Nutt03_Brain_CO_2 Nutt03_Brain_CO_5 Alizadeh00_Blood_B_cells_anti_IgM_24h_lc8n057 Perou00_BC124B_AF Pomeroy02_Brain_MD_27 Bhattacharjee01_AD-163t1-A203-8 * Bhattacharjee01_AD-309t1-A242-8 Boldrick02_Dose_Response_Dataset_Bp338_100X_dose_timecourse_12_0hr Boldrick02_Dose_Response_Dataset_Bp338_100X_dose_timecourse_4_0hr Perou00_BC38_LN38 Perou99_HMEC_X_NB2 Boldrick02_Dose_Response_Dataset_S_aureus_1000X_dose_timecourse_2_0hr Bhattacharjee01_AD-243t1x-A161-4 * Bhattacharjee01_AD-226t2-A151-4 Bhattacharjee01_AD-353t1-A129-3 Bhattacharjee01_AD-203t1-A140-4 * Perou00_BC711A_AF Alizadeh00_FL_11_CD19_ Boldrick02_Dose_Response_Dataset_Bp338_10X_dose_timecourse_2_0hr Garber01_230_97_SCLC Bhattacharjee01_AD-330t2-A279-10 Sorlie01_BC308B_BE Garber01_59_96_SCC Chen02_HCC_HBV_SF34_1 Chen02_HCC_HBV_SF34_3 Chen02_HCC_HBV_HK66_T1 Chen02_HCC_HBV_HK66_T3 Chen02_HCC_HBV_HK66_T5 Chen02_HCC_HBV_HK66_T4 Chen02_HCC_HBV_HK66_T2 Chen02_Liver_HBV_HK13 Chen02_Liver_HBV_HK37 Chen02_Liver_HBV_HK64 Chen02_Liver_HBV_HK84 Lessnick02_Run 2, Day 3 Lessnick02_Run 2, Day 4 Chen02_Liver_SF6 Chen02_Liver_HBV_CH2 Chen02_Adenoma_HK69 Chen02_Liver_HBV_SF12 Chen02_Liver_HBV_SF18 Chen02_Liver_HBV_HK7 Chen02_HCC_HBV_SF23 Pomeroy02_Brain_MD_34 Chen02_Liver_HBV_SF23 Chen02_HCC_HBV_SF21 Chen02_Liver_HBV_HK6 Chen02_Liver_HBV_SF15 Chen02_Liver_HCV_SF28_1 Chen02_Liver_HBV_HK9 Chen02_Liver_HBV_HK5 Chen02_Liver_HCV_SF28_2 Garber01_222_97_normal Garber01_306_99_normal Garber01_219_97_normal Garber01_314_99_normal Garber01_315_99_normal Alizadeh00_Blood_B_cells_lc8n076 Alizadeh00_Cord_Blood_B_cells Rosenwald01_CLL_55 Garber01_137_96_Adeno Garber01_204_97_Adeno Sorlie01_BC4_LN4 Alizadeh00_Blood_B_cells_memory_CD27_ Alizadeh00_Blood_B_cells_naive_CD27_ Bhattacharjee01_AD-318t3-A107-3 Nutt03_Brain_NO_3 Alizadeh00_Blood_B_cells Nutt03_Brain_NG_8 Nutt03_Brain_NO_14 Rosenwald01_CLL_69 Rosenwald01_CLL_66_SL106 Rosenwald01_CLL_41 Pomeroy02_Brain_MD_28 Pomeroy02_Brain_MD_48 Pomeroy02_Brain_PNET_2 Detweiler01_E2_U937_mock_4hb Alizadeh00_Blood_B_cells_anti_IgM_6h Sorlie01_BC17 Sorlie01_BC37_FA Chen02_FNH_HK72 Sorlie01_BC20_FA Garber01_12_00_Adeno Chen02_FNH_HK70 Chen02_Liver_HBV_HK47 Chen02_HCC_HBV_HK62_T2 Chen02_HCC_HBV_HK62_T1 Alizadeh00_CLL_71_Richters Alizadeh00_CLL_13_lc7b048 Garber01_fetal_lung Perou00_BC114B_AF Alizadeh00_Lymph_Node_lc4b007 Blader01_HFF_infected_with_PDS_tachyzoites_24_hour Sorlie01_Normal_Breast2 Sorlie01_Normal_Breast1 Ross00_Breast_Tumor_16_X_NCI_reference Ross00_BC2_Lymph_Node_X_NCI_reference Ross00_Normal_Breast Bhattacharjee01_AD-370t1x-A112-3 Bhattacharjee01_AD-259t1-A171-4 Bhattacharjee01_AD-250t1-A166-4 Bhattacharjee01_AD-208t1-A143-4 Bhattacharjee01_AD-238t2x-A157-4 Bhattacharjee01_AD-207t1-A142-4 Rosenwald01_CLL_47 Rosenwald01_CLL_62 Bhattacharjee01_AD-262t1a-A259-10 * Bhattacharjee01_AD-240t1-A159-4 Bhattacharjee01_AD-188t1-A216-8 Bhattacharjee01_AD-213t1-A146-4 Bhattacharjee01_AD-232t1-A154-4 Bhattacharjee01_AD-317t1-A271-10 Bhattacharjee01_AD-267t1-A91-3 Bhattacharjee01_AD-239t1-A158-4 Bhattacharjee01_AD-327t1-A276-10 * Bhattacharjee01_AD-366t1-A109-3 Bhattacharjee01_AD-362t1-A282-10 Bhattacharjee01_AD-331t1-A219-8 Bhattacharjee01_AD-170t1-A251-10 ** Bhattacharjee01_AD-167t1 d dup -A210-8 * Bhattacharjee01_AD-119t3-A195-8 Bhattacharjee01_AD-302t3-A238-8 * Bhattacharjee01_AD-130T1-A1-1 Bhattacharjee01_AD-AD31-A289-10 Bhattacharjee01_NL-3104-A331-6 Bhattacharjee01_NL-6943-A337-6 Bhattacharjee01_NL-2562-A413-7 Bhattacharjee01_NL-1179-A408-7 Bhattacharjee01_NL-4083-A333-6 Bhattacharjee01_NL-6084-A335-6 Bhattacharjee01_NL-7530-A338-6 Bhattacharjee01_NL-4353-A334-6 Bhattacharjee01_NL-3681-A332-6 Bhattacharjee01_NL-6853-A336-6 Bhattacharjee01_NL-1884-A411-7 Bhattacharjee01_NL-1675-A409-7 Bhattacharjee01_NL-2378-A412-7 8560 DEGS - 1 -0.01 0.9 0.9 0.2 0.9 1.4 -0.2 0.6 -0.5 -0.2 0.3 0.1 -0.2 0.7 0.2 0.0080 0.0020 6.0E-4 0.1 0.02 0.5 0.1 0.1 0.2 -0.3 0.1 0.1 0.3 0.1 0.5 0.1 0.4 0.2 1.4 0.8 0.3 0.1 1.1 0.2 0.7 0.8 0.4 0.6 0.6 -0.3 0.7 0.2 0.2 1.3 0.9 0.6 1.1 2.2 -0.02 0.3 0.1 0.6 0.5 -0.3 2.0 1.7 1.1 0.3 0.5 1.3 0.8 -0.5 -0.5 0.5 -0.04 0.02 -0.3 0.4 -0.1 0.1 0.2 0.04 0.2 0.1 -0.2 -0.2 0.1 -0.4 1.1 -0.3 -1.2 0.3 0.6 0.09 0.01 0.3 0.2 0.3 -0.4 -0.2 0.7 0.1 0.05 -0.6 0.0070 0.8 -0.3 -0.4 0.8 -0.2 -0.1 -0.1 1.1 -0.3 0.5 0.8 -0.2 0.3 2.6 -0.1 0.6 1.2 -0.1 0.01 0.2 0.8 0.6 0.8 0.4 0.5 1.0 1.0 -0.5 0.4 -0.1 -0.1 0.1 -0.1 -0.1 -0.1 0.1 0.3 0.2 0.4 0.2 1.2 0.0010 -0.01 -0.2 -0.0050 -0.03 0.04 0.7 0.3 0.4 0.4 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