PAtom Member List

This is the complete list of members for PAtom, including all inherited members.

activate()PAtom [inline]
ApplyTransform(const Matrix4 &transform)PAtom
changePosition(const Vector3 &newPosition)PAtom
FindAnyCollision() constPAtom
FindSelfCollision() constPAtom
FindStaticCollision() constPAtom
getAllCollidingEither() constPAtom
getAllCollidingSelf() constPAtom
getAllCollidingStatic() constPAtom
getBond(PResidue *res, const string &id)PAtom
getBonds() constPAtom [inline]
getChain() constPAtom
getColor() constPAtom [inline]
getCovalentRadius() constPAtom [inline]
getGridPos() constPAtom
getID() constPAtom [inline]
getName() constPAtom [inline]
getOccupancy() constPAtom [inline]
getParentBlock()PAtom [inline]
getParentResidue()PAtom
getPos() constPAtom [inline]
getSpaceManager() constPAtom
getTempFactor() constPAtom [inline]
getVanDerWaalsRadius() constPAtom [inline]
inactivate()PAtom [inline]
InAnyCollision() constPAtom
InSelfCollision() constPAtom
InStaticCollision() constPAtom
isActive() constPAtom [inline]
isBonded(const PAtom *other) constPAtom
isOnBackbone() constPAtom
PAtom(PBlock *block, const string &name, Vector3 position, const string &id)PAtom
PBlock classPAtom [friend]
PBond classPAtom [friend]
PResidue classPAtom [friend]
revertColor()PAtom [inline]
setColor(const GLColor setColor)PAtom [inline]
setOccupancy(Real newVal)PAtom [inline]
setTempFactor(Real newVal)PAtom [inline]
shortestBondPath(const PAtom *a1, const PAtom *a2, int threshold=-1)PAtom [static]
traverseAtoms(AtomFunctor *atomFn)PAtom [inline]
traverseBonds(BondFunctor *bondFn)PAtom [inline]
traverseChain(AtomFunctor *atomFn, BondFunctor *bondFn)PAtom
WithinActiveBlock() constPAtom
~PAtom()PAtom


Generated on Wed May 16 20:22:12 2007 for LoopTK: Protein Loop Kinematic Toolkit by  doxygen 1.5.1