GENE NAME GWEIGHT Chen02_HCC_HBV_HK27 Chen02_HCC_HBV_SF35_1 Chen02_HCC_SF9 Chen02_HCC_HBV_SF35_2 Chen02_HCC_HBV_HK4 Chen02_HCC_HBV_HK54 Garber01_132_95_Adeno Detweiler01_E1_U937_wild_type_30m Garber01_299_99_Adeno Iyer99_Serum_20 Iyer99_Serum_16 Iyer99_Serum_24 Whitfield02_18h_Thy_Noc_Exp4 Whitfield02_16h_Thy_Noc_Exp4 Bhattacharjee01_SQ-6147-A329-5 Chen02_HCC_HBV_HK43 Chen02_HCC_HBV_HK44 Whitfield02_10_hr_Hela_Double_Thymidine Detweiler01_E3_U937_mock_1ha Pomeroy02_Brain_PNET_1 Chen02_HCC_HBV_HK15 Chen02_HCC_HBV_HK48 Chen02_HCC_HBV_SF12 Sorlie01_BC404B_BE Chen02_HCC_HBV_HK84 Chen02_HCC_HBV_HK63_T1 Sorlie01_BC606B_AF Alizadeh00_OCI_Ly1 Bhattacharjee01_AD-186T1-A27-1 Sorlie01_BC713A_BE Alizadeh00_OCI_Ly10_lc7b042 Alizadeh00_OCI_Ly10 Bhattacharjee01_AD-382t1-A117-3 * Alizadeh00_DLCL_0007 Perou00_T47D Alizadeh00_DLCL_0007_lc4b028 Alizadeh00_DLCL_0052 Alizadeh00_DLCL_0052_lc4b060 Shipp02_DLBC16 Garber01_245_97_node Sorlie01_BC214B_BE Chen02_HCC_HBV_HK65_T4 Pomeroy02_Brain_MD_59 Pomeroy02_Brain_Rhab_1 Pomeroy02_Brain_Rhab_5 Alizadeh00_SUDHL6 Alizadeh00_DLCL_0008 Garber01_246_97_SCC_c Golub99_ALL 1234 ML Shipp02_DLBC13 Chen02_HCC_HBV_HK64_T7 Pomeroy02_Brain_MD_19 Chen02_HCC_HBV_CH2 Staunton01_LEUK_CCRFCEM Nutt03_Brain_CG_5 Sorlie01_BC_HBC5 Nutt03_Brain_CG_6 Nutt03_Brain_CG_11 Bhattacharjee01_SMCL-301-A306-5 Staunton01_MELAN_M14 Perou00_BT_549 Lessnick02_Run 2, Day 0 Lessnick02_Run1, Day 0 Bhattacharjee01_SQ-SQ10t1-A362-6 Bhattacharjee01_AD-131T1-A15-A200-1* Bhattacharjee01_AD-374t1-A114-3 Bhattacharjee01_SQ-3529-A324-5 Bhattacharjee01_SQ-SQ6t1-A360-6 Pomeroy02_Brain_MD_22 Bhattacharjee01_SQ-2572-A321-5 Bhattacharjee01_SMCL-SMCL3t1-A290-10 Bhattacharjee01_SMCL-SMCL9t1-A357-6 Bhattacharjee01_SMCL-5937-A307-5 Sorlie01_BC1369 Garber01_161_96_Adeno Ross00_MOLT_4_CL7006_LEUKEMIA Ross00_CCRF_CEM_CL7003_LEUKEMIA Sorlie01_BC23 Alizadeh00_WSU1 Garber01_42_95_SCC Garber01_315_99_node Chen02_HCC_HBV_HK67_T3 Chen02_HCC_HBV_HK67_T2 Chen02_HCC_HBV_HK3 Chen02_HCC_HBV_HK14 Chen02_HCC_HBV_HK13 Ross01_HCC_1937 Chen02_HCC_HBV_HK37 Chen02_Undifferentiated_Carcinoma_HK17 Chen02_HCC_HBV_HK9 Golub99_ALL_5982_B-cell Chen02_HCC_HBV_HK63_T2 Blader01_Reverse_labelling_expt_ Garber01_230_97_SCLC Chen02_HCC_HBV_HK20 Sorlie01_BC805A_BE Garber01_75_95_combined Chen02_HCC_HK6 Sorlie01_BC790 Ramaswamy01_Tumor__Leukemia_ALL-T_ALL_ 9186 _BM Armstrong01_AML_11 Golub99_ALL_19183_B-cell Golub99_ALL_9723_T-cell Golub99_ALL_21302_B-cell Ramaswamy01_Tumor__Lymphoma_Large_B-Cell_L_B_CELL_S98_12453_R Golub99_ALL_17281_B-cell Golub99_ALL 23368 TA- Norel Golub99_ALL_19881_T-cell Ramaswamy01_Tumor__Leukemia_ALL-T_ALL_ 87_52 _BM Ramaswamy01_Tumor__Lymphoma_Large_B-Cell_L_B_CELL_S94_17150_R Ramaswamy01_Normal__Germinal_Center_GC45 Ramaswamy01_Normal__Germinal_Center_GC48 Shipp02_DLBC38 Shipp02_DLBC33 Ramaswamy01_Tumor__Leukemia_ALL-T_ALL_ 17269 _BM Ramaswamy01_Tumor__CNS_Glioblastoma_GlioB_8 Nutt03_Brain_CG_12 Armstrong01_ALL_14 Armstrong01_ALL_2 Armstrong01_MLL_16 Armstrong01_MLL_12 Armstrong01_ALL_10 Armstrong01_ALL_16 Armstrong01_ALL_15 Chen02_HCC_HBV_SF27 Shipp02_DLBC46 Shipp02_DLBC31 Shipp02_DLBC52 Ross01_HB2 Alizadeh00_Jurkat Staunton01_MELAN_SKMEL5 Bhattacharjee01_SMCL-SMCL4t1-A354-6 Bhattacharjee01_SMCL-SMCL8t1-A356-6 Ramaswamy01_Normal__Germinal_Center_GC3 Nutt03_Brain_NG_13 Perou99_HMEC_X_MCF7_NCI Perou00_MCF7_NCI Chen02_Hep40_cells Perou00_RPMI_8226 Boldrick02_U937_Dataset_BpTox6_timecourse_0_hr Perou00_NB4_ATRA Perou00_MOLT4 Ramaswamy01_Normal__Germinal_Center_GC2 Chen02_SNU449_cells Chen02_SK_HEP_1_cells Chen02_Hep3B_cells Detweiler01_E6_U937_wild_type_2hb Chen02_SNU398_cells Chen02_SNU423_cells Chen02_SNU475_cells Chen02_SNU387_cells Chen02_SNU182_cells Chen02_HepG2_cells Perou00_MDA_MB_231_NCI Chen02_HCC_HCV_SF30 Chen02_HCC_HBV_HK42 Boldrick02_U937_Dataset_Bp338_timecourse_4_0_hr Perou00_SK_BR_3 Sorlie01_BC406A_2ndTUMOR Boldrick02_U937_Dataset_Bp338_timecourse_0_5_hr Boldrick02_U937_Dataset_Bp338_timecourse_2_0_hr Boldrick02_U937_Dataset_BpA2_6_timecourse_0_0_hr Boldrick02_U937_Dataset_BpA2_6_timecourse_0_5_hr Boldrick02_U937_Dataset_BpA2_6_timecourse_4_0_hr Garber01_314_99_SCLC Sorlie01_BC115B_BE Iyer99_Unsynchronized Iyer99_Unsynchronized_cyc Alizadeh00_OCI_Ly12 Perou00_SW872 Perou00_BT_474_ATCC Pollack99_HMEC_X_BT474_sva117_sf Boldrick02_U937_Dataset_Uninfected_timecourse_4_0_hr Boldrick02_U937_Dataset_Uninfected_timecourse_1_0_hr Boldrick02_U937_Dataset_Uninfected_timecourse_6_0_hr Boldrick02_U937_Dataset_Uninfected_timecourse_0_0_hr Boldrick02_U937_Dataset_Uninfected_timecourse_2_0_hr Boldrick02_U937_Dataset_Uninfected_timecourse_0_5_hr Bhattacharjee01_AD-207t1-A142-4 Bhattacharjee01_AD-119t3-A195-8 Bhattacharjee01_NL-6853-A336-6 Bhattacharjee01_NL-6943-A337-6 Bhattacharjee01_NL-4353-A334-6 Bhattacharjee01_AD-356t1-A175-4 Bhattacharjee01_AD-370t1x-A112-3 Bhattacharjee01_NL-1884-A411-7 Bhattacharjee01_AD-260t1a-A172-4 * Bhattacharjee01_NL-3681-A332-6 Bhattacharjee01_NL-1675-A409-7 Bhattacharjee01_NL-2378-A412-7 Bhattacharjee01_AD-261t1b-A173-4 Bhattacharjee01_AD-366t1-A109-3 Bhattacharjee01_AD-201t1-A138-4 Bhattacharjee01_AD-250t1-A166-4 Bhattacharjee01_COID-COID6t1-A343-6 Bhattacharjee01_NL-4083-A333-6 Bhattacharjee01_NL-2562-A413-7 Bhattacharjee01_NL-3104-A331-6 Shipp02_FSCC1 Shipp02_FSCC15 Shipp02_FSCC3 Shipp02_DLBC15 Shipp02_FSCC8 Shipp02_DLBC29 Shipp02_FSCC9 Shipp02_FSCC7 Shipp02_FSCC11 Shipp02_FSCC19 Shipp02_FSCC14 Golub99_AML 9 PK Relap Golub99_AML 10 PK Relap Golub99_ALL 522 TA- ML Norel Golub99_ALL 1256 TA ML Norel Golub99_AML 15 PK Norel Golub99_AML 5 ML Relap Golub99_AML_7 Golub99_ALL_18239_B-cell Golub99_ALL_9335_B-cell Garber01_156_96_Adeno Rosenwald01_CLL_48 Chen02_Liver_HBV_HK39 Chen02_Liver_HBV_HK63 Alizadeh00_CLL_65_ Rosenwald01_CLL_24 Garber01_204_97_Adeno Chen02_Liver_HCV_SF30 Chen02_Liver_HBV_HK17 Chen02_Liver_HBV_HK11 Chen02_Liver_HBV_HK14 Chen02_Liver_HBV_HK3 Chen02_Liver_HBV_SF22 Ross01_BJ_hTERT_PD210_Fibroblasts_UTSW Alizadeh00_DLCL_0011_lc4b030 Chen02_Liver_HBV_HK64 Chen02_Liver_HBV_SF35 Sorlie01_BC31_0 Chen02_Liver_HBV_HK46 Chen02_Liver_HK41 Chen02_Liver_HBV_HK29 Chen02_Adenoma_HK73 Chen02_Liver_HBV_HK28 Chen02_Liver_HBV_HK24 Chen02_Liver_HBV_HK1 Chen02_Liver_HBV_HK30 Boldrick02_Dose_Response_Dataset_Untreated_timecourse_0_5hr Boldrick02_Dose_Response_Dataset_S_aureus_100X_dose_timecourse_2_0hr Boldrick02_Dose_Response_Dataset_S_aureus_100X_dose_timecourse_4_0hr Iyer99_Serum_cyc_2_hours Iyer99_Serum_06 Whitfield02_8_hr_Hela_Double_Thymidine_exp2 Whitfield02_7_hr_Hela_Double_Thymidine_exp2 Blader01_HFF_infected_with_PDS_tacyzoites_24_hour Blader01_HFF_infected_with_PDS_tachyzoites_14_hours_duplicate_1 Chen02_Liver_HBV_HK42 Chen02_Liver_HBV_HK37 Alizadeh00_Blood_B_cells_anti_IgM_IL_4_6h Alizadeh00_Blood_B_cells_memory_CD27_ Garber01_199_97_Adeno_c Chen02_Liver_HCV_SF29_S1 Chen02_Liver_HCV_SF29_S2 Perou00_BC402B_AF Perou00_BC213A_AF Chen02_Liver_HBV_HK10_S2 Chen02_Liver_HBV_HK4 Boldrick02_Dose_Response_Dataset_Untreated_timecourse_0_0hr Rosenwald01_CLL_61 Rosenwald01_CLL_58 Boldrick02_Dose_Response_Dataset_Untreated_timecourse_1_0hr Perou00_BC118A_AF Rosenwald01_CLL_21 Rosenwald01_CLL_19 Rosenwald01_CLL_53 Chen02_Liver_SF16 Chen02_Liver_SF33 Chen02_Liver_SF9 Chen02_Liver_SF8 Lessnick02_Run 2, Day 2 Lessnick02_Run 1, Day 2 Lessnick02_Run 1, Day 3 Lessnick02_Run 1, Day 4 Lessnick02_Run 2, Day 3 Lessnick02_Run 2, Day 4 Alizadeh00_Blood_B_cells_anti_IgM_6h Alizadeh00_Blood_B_cells_anti_IgM_CD40L_IL_4_6h Sorlie01_Normal_Breast1 Armstrong01_ALL_13 Staunton01_NSCLC_NCIH226 Garber01_306_99_node Sorlie01_BC608B_BE Pomeroy02_Brain_MGlio_3 Pomeroy02_Brain_MD_41 Chen02_Liver_HBV_HK47 Pomeroy02_Brain_Ncer_4 Chen02_Liver_HBV_HK62 Perou00_BC114B_AF Chen02_HCC_HBV_HK51 Chen02_Liver_SF6 Chen02_Liver_HBV_HK84 Chen02_Liver_HBV_SF18 Chen02_Liver_HBV_CH2 Chen02_Liver_HBV_SF12 Chen02_Liver_HBV_SF23 Chen02_Liver_HBV_HK9 Chen02_Liver_HBV_SF15 Chen02_Liver_HCV_SF28_1 Chen02_Liver_HBV_HK7 Chen02_Liver_HBV_HK5 Chen02_Liver_HCV_SF28_2 Chen02_HCC_HBV_HK5 Sorlie01_Normal_Breast3 Chen02_Liver_HBV_HK38 Chen02_Adenoma_HK69 Sorlie01_Normal_Breast2 Garber01_fetal_lung Perou00_BC808A_AF Rosenwald01_CLL_62 Chen02_HCC_HBV_HK60 Chen02_HCC_HBV_SF21 Sorlie01_BC201B_BE Sorlie01_BC210B_AF Chen02_Liver_HBV_HK67 Sorlie01_BC17 Chen02_Liver_SF11 Chen02_Liver_SF36 Chen02_Liver_SF10 Detweiler01_E3_U937_wild_type_4h Alizadeh00_CLL_68_lc4b068 Detweiler01_E3_U937_wild_type_1hb Detweiler01_E3_U937_wild_type_2h Detweiler01_E3_U937_wild_type_0_5h Alizadeh00_CLL_13_lc7b048 Alizadeh00_Blood_B_cells_anti_IgM_CD40L_6h Ross00_Breast_Tumor_16_X_NCI_reference Ross00_Breast_Tumor_2_X_NCI_reference Ross00_BC2_Lymph_Node_X_NCI_reference Alizadeh00_Blood_B_cells Alizadeh00_Cord_Blood_B_cells Garber01_219_97_normal Ross00_Normal_Breast Alizadeh00_Lymph_Node_lc4b007 Blader01_HFF_infected_with_PDS_tachyzoites_24_hour Ross01_HMS32 Chen02_FNH_HK70 Garber01_222_97_normal Garber01_306_99_normal Garber01_314_99_normal Garber01_315_99_normal Nutt03_Brain_NO_11 Nutt03_Brain_NO_8 Nutt03_Brain_NG_11 Nutt03_Brain_NO_3 Nutt03_Brain_NG_9 Nutt03_Brain_CG_13 Nutt03_Brain_CO_2 Alizadeh00_CLL_60_lc4b069 Alizadeh00_CLL_71 Armstrong01_AML_25 Armstrong01_AML_26 Armstrong01_AML_8 Armstrong01_AML_21 Armstrong01_AML_28 Armstrong01_AML_15 Armstrong01_AML_14 Armstrong01_AML_5 Armstrong01_ALL_3 4172 MCM3 - 1 1.1 1.0 1.6 0.9 0.6 0.4 -0.1 0.6 1.2 0.09 0.1 1.1 1.4 0.7 0.3 1.0 0.2 0.9 0.2 0.04 -0.1 -0.1 1.0 0.7 1.6 1.5 0.6 1.2 0.9 -0.5 0.3 0.6 0.8 0.8 1.1 0.1 0.5 1.2 1.8 0.7 0.9 0.3 0.9 1.6 1.4 1.5 1.4 0.2 1.0 1.5 1.5 2.2 1.8 -0.2 0.7 1.2 1.7 0.5 0.8 1.1 2.4 2.0 1.9 1.4 1.7 1.2 1.0 0.2 1.0 2.2 1.7 1.4 1.1 1.2 0.6 0.7 0.9 1.3 0.6 0.7 0.4 0.4 1.2 0.5 2.0 1.7 0.7 1.4 1.2 0.5 1.2 1.1 1.1 0.3 1.3 1.0 0.3 0.7 1.9 1.4 1.1 1.4 1.3 1.4 1.5 1.3 1.2 0.6 1.5 1.3 1.1 1.2 2.0 0.2 1.0 1.8 1.8 1.6 2.2 2.0 1.5 1.6 1.9 1.3 1.7 1.4 2.2 1.5 2.5 1.4 2.0 1.6 1.0 0.9 1.2 1.9 1.7 1.1 1.6 0.3 -0.08 1.1 0.2 0.6 0.9 0.8 -1.4 -1.1 -0.9 -0.4 -2.0 -2.1 -1.8 -2.6 -2.6 -0.3 -1.9 -1.2 -1.8 -0.8 -1.3 -1.8 -1.9 -1.2 -0.9 -0.7 -1.5 -1.5 -1.6 -1.0 -1.0 -1.7 -1.4 -1.4 -1.2 -1.2 -1.3 -1.0 -2.0 -1.1 -1.8 -2.1 -0.7 -1.2 -1.6 -0.3 0.03 -0.5 -1.0 -0.2 0.6 0.5 -0.6 -0.6 -1.1 -0.3 -2.0 -1.5 -0.0020 1.6 -0.4 -0.9 -0.6 -1.0 -1.0 -1.0 -1.3 -1.3 -1.0 -0.3 -0.8 -1.1 -0.5 0.8 -0.8 -0.6 -0.2 -0.4 -0.8 -0.5 -0.01 -0.2 0.08 -0.4 0.01 -0.2 -2.0 -0.9 -2.5 -2.9 -1.2 -1.4 1.3 -0.1 -0.7 -0.2 -3.4 -0.7 -0.4 -0.4 -1.4 -0.7 -0.3 -0.8 -1.5 -1.5 -0.8 -1.0 -0.2 -1.2 -1.7 -0.7 -1.3 -1.7 -1.5 -0.8 -1.3 -0.6 0.1 -0.8 -0.7 -0.5 -1.4 -0.2 -0.3 -0.5 -0.7 0.1 -0.7 -0.3 -0.6 -0.5 -2.4 -1.7 -2.0 -1.0 -0.9 -0.5 -1.6 -1.1 -1.0 -0.7 -1.5 -1.3 -1.9 -1.3 -1.4 -1.4 -1.3 -1.5 -1.5 -1.6 -1.0 -2.6 -2.4 -2.2 -1.9 -3.8 -3.5 -7.8 7153 TOP2A - 1 0.7 0.4 1.3 0.7 0.3 0.1 -0.04 1.0 0.8 1.4 0.4 2.3 0.04 0.1 1.0 1.3 0.7 -0.04 0.8 -0.6 -0.2 -0.2 1.3 0.5 1.0 0.4 0.6 1.4 0.2 1.0 1.0 1.0 0.8 1.1 0.7 0.9 0.9 0.8 1.6 0.5 0.2 0.7 1.6 1.4 1.3 0.3 0.5 0.5 0.2 0.8 1.0 0.6 -0.2 0.4 0.9 1.2 0.9 1.3 1.9 0.7 1.2 1.2 0.1 1.9 1.8 0.4 1.1 0.6 0.1 -0.5 1.0 1.6 1.4 0.9 1.0 1.1 1.3 0.9 1.0 1.0 1.6 1.5 1.0 0.7 1.2 0.5 1.6 1.5 1.4 0.9 0.3 1.1 0.9 0.4 0.7 1.0 0.6 1.6 0.9 1.2 1.2 1.2 0.7 0.5 0.9 1.7 1.5 1.2 1.5 1.6 1.7 0.9 -0.6 -1.1 0.1 3.0 2.6 2.2 1.5 1.1 1.6 1.1 1.8 1.8 0.9 1.6 1.5 1.0 1.1 0.9 0.06 2.2 3.2 2.2 2.6 1.5 1.3 2.1 1.4 1.7 0.9 1.4 3.2 2.0 1.7 2.0 2.3 2.6 2.1 1.9 1.7 2.2 2.0 1.8 1.9 1.6 1.3 1.6 1.0 2.4 1.7 1.8 1.8 2.0 1.3 1.1 1.7 2.1 1.1 1.7 0.8 0.5 1.6 1.7 1.6 1.7 1.5 1.6 -1.1 -1.1 -2.4 -1.5 -2.4 -2.4 -2.4 -2.4 -2.4 -2.4 -2.4 -2.4 -2.1 -2.4 -2.1 -2.4 -2.4 -2.4 -2.4 -2.3 -0.2 -1.2 -0.6 -1.1 -0.6 -1.6 -0.8 -1.4 -1.5 -0.7 -0.2 -1.4 -0.6 -2.6 -1.1 -1.3 -1.3 -0.4 -1.2 0.0010 -0.4 -0.2 -0.8 -0.1 -0.6 -1.0 -0.4 -1.4 -0.7 -0.7 -0.2 -0.1 -0.5 -0.2 -0.9 -0.6 -1.8 -1.1 -0.7 -0.5 -1.1 -1.0 -0.9 -0.3 -0.7 -0.4 -1.5 -1.3 0.4 -0.7 -1.1 0.4 2.1 -1.3 -0.3 -1.0 -0.01 -0.2 -0.8 -0.3 0.6 0.1 -0.7 -1.2 -1.3 -1.6 -2.4 -2.2 -3.1 -2.7 -1.0 -2.0 -1.1 -1.6 -0.4 -0.7 -1.0 -0.6 -1.3 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