GENE NAME GWEIGHT Chen02_HCC_HCV_SF20 Perou99_HMEC_X_BC14_0096_5k Perou99_HMEC_X_BC1498 Perou99_HMEC_X_BC23_0090_5k Perou99_HMEC_X_BC2_2 Perou99_HMEC_X_BC1257 Ross00_K_562_CL7005_LEUKEMIA Perou99_HMEC_X_BC1369 Chen02_Liver_HBV_HK31 Chen02_Liver_HBV_HK33 Perou99_HMEC_X_HMEC_Interferon_alpha_24hrs Perou99_HMEC_X_Senescent_HMEC_2 Perou99_HMEC_control_X_HMEC_Interferon_gamma_24hrs Bhattacharjee01_SQ-SQ14t1-A365-6 Bhattacharjee01_AD-268t1 dup b4 -A93-3 ** Detweiler01_E3_U937_mock_1ha Perou00_BT_474_ATCC Bhattacharjee01_AD-374t1-A114-3 Perou99_HMEC_X_MCF7_NCI Bhattacharjee01_AD-275t1-A95-3 Sorlie01_BC104A_BE Ross00_SF_539_CL12016_CNS Rosenwald01_JVM_HH Perou99_HMEC_X_NB2 Boldrick02_Diversity_Dataset_Bp_Minnesota1_timecourse_4_0_hr Boldrick02_Diversity_Dataset_E_coli1_timecourse_12_0_hr Whitfield02_4hr_Hela_Double_Thymidine Garber01_184_96_Adeno Perou99_HMEC_X_HMEC_TGFbeta_24hrs 23144 23144 1 2.3 1.2 0.6 0.4 0.3 -0.5 1.9 -0.8 -0.7 -1.2 0.3 -1.2 0.3 -0.7 0.7 1.3 0.4 55003 PAK1IP1 - 1 0.1 1.2 1.2 0.3 -0.01 0.1 2.3 0.5 0.7 -0.7 -0.6 -1.4 0.3 -0.06 0.04 -1.2 -0.4 0.03 0.8 -1.7 6879 TAF7 - 1 0.5 0.5 1.0 0.3 0.1 -0.8 2.3 0.1 -0.2 -1.3 -1.3 -1.1 -0.02 0.4 -0.2 -0.2 -2.2 1.0 -0.7 0.02 0.1 -0.3 -1.6 1.4 23480 SEC61G - 1 0.3 0.4 0.02 0.9 0.6 1.0 -0.8 0.3 -0.1 -0.4 -0.4 -1.3 -0.1 0.4 0.3 0.3 -0.4 -0.4 0.4 -1.4 -1.3 0.6 1.9 -0.4 4927 NUP88 - 1 -0.4 0.2 0.5 1.0 0.6 0.8 2.6 1.3 0.08 0.1 -0.5 -0.9 -1.4 -0.2 0.3 0.2 0.3 -0.8 0.5 -1.9 0.9 -1.7 -0.2 -0.1 1.1 -1.1 84453 84453 1 -0.4 0.1 1.1 0.8 -0.7 -0.3 -1.3 2.6 0.1 0.07 -1.5 -0.8 0.7 -0.04 -0.8 -0.2 -1.4 0.03 -0.9 -1.0 5713 PSMD7 - 1 -0.4 0.4 1.5 1.2 0.2 -0.4 -1.1 2.0 0.2 -0.4 -0.1 -0.5 0.2 1.1 -0.5 0.0020 -0.3 0.1 -0.4 -0.2 -0.2 -0.7 -0.08 0.2 0.09 -0.01 -0.3 2342 FNTB - 1 0.5 0.6 1.2 1.0 0.3 -0.4 -0.1 4.0 -0.4 0.5 0.5 -0.6 0.3 1.0 -0.04 0.5 -1.5 -1.6 -1.8 -1.1 -1.8 0.06 0.2 -0.7 5645 PRSS2 - 1 0.8 -0.04 0.6 -0.08 0.3 -0.1 1.4 1.1 1.7 -0.1 0.2 -0.2 -2.2 -2.2 -1.3 -0.9 -2.2 -1.4 -0.2 0.6 -0.8 -0.1 -1.9 -1.2 9962 SLC23A2 - 1 -0.9 0.06 0.8 0.6 0.8 1.3 -1.1 1.3 1.6 1.0 -0.7 -0.6 -0.8 -1.7 -1.1 -1.7 -0.8 -2.0 -1.6 -2.2 -1.3 0.5 -0.3 -0.2 -1.7 -1.7 1407 CRY1 - 1 -0.4 0.1 1.0 1.2 0.2 1.1 0.4 2.4 0.6 0.5 -1.0 -1.1 -1.0 -0.6 0.3 -0.7 2.8 -0.09 -0.02 0.2 -0.6 -2.0 5310 PKD1 - 1 0.6 0.9 1.4 1.1 0.3 -0.2 2.4 -1.2 -1.3 -2.4 -2.5 -2.5 -2.5 -1.3 -2.5 0.2 0.4 -0.2 -0.4 0.1 -0.9 1436 CSF1R - 1 0.6 0.6 0.6 0.1 0.8 0.5 -0.8 2.4 1.2 1.0 -1.5 -1.2 -1.9 -1.5 -2.5 -1.9 -2.7 -0.9 -0.6 0.08 -0.4 -1.4 0.05 -0.01 0.05 2037 EPB41L2 - 1 0.6 0.2 0.8 1.5 -0.9 -0.2 -0.4 1.1 -0.03 0.7 -1.1 -0.4 -0.09 -0.4 -2.0 1.8 -2.1 -2.0 -1.5 -1.1 -1.7 0.9 0.8 -0.6 -0.8 1.1 9397 NMT2 - 1 -0.0080 0.3 0.5 0.1 0.5 2.0 -0.8 -0.6 -0.5 -1.2 -0.6 -1.3 -1.1 -0.7 -1.0 -1.6 64943 64943 1 0.05 0.2 0.4 0.3 -0.1 0.7 2.4 1.1 1.1 -0.7 -0.6 -1.1 -0.8 -0.1 -1.0 -1.5 -1.3 0.09 -1.7 -0.5 4744 NEFH - 1 0.01 0.2 0.1 0.4 0.3 0.03 1.9 0.07 0.6 -0.5 -0.8 -1.4 -1.0 -1.0 -1.2 -2.2 -1.0 -1.2 -1.0 -3.3 -1.3 -0.1 -0.4 -0.2 113 ADCY7 - 1 1.0 0.1 -0.07 0.5 0.4 0.2 1.6 1.1 0.5 1.0 -0.4 -0.06 -0.4 -1.3 -1.0 -1.3 -1.5 -1.4 -2.4 -2.3 -2.0 -0.1 -0.5 -0.7 -0.3 -0.1 0.1 -1.2 0.6 725 C4BPB - 1 -1.5 -0.4 0.4 0.8 0.7 0.3 0.0050 0.5 0.8 1.0 0.2 -0.3 -1.1 -1.1 -1.1 1.8 -1.6 -1.1 -1.3 -1.1 -0.1 -1.1 -1.1 0.8 -1.5 -0.7 84649 DGAT2 - 1 1.6 -0.6 0.2 -0.5 1.1 0.9 0.3 2.2 -0.1 -0.03 -0.8 -0.5 -1.5 -0.4 -1.4 -1.9 0.03 1.5 1.8 -0.03 -2.4 -0.3 5175 PECAM1 - 1 1.5 0.9 1.0 -0.4 0.7 1.3 0.1 1.1 -0.5 -0.09 -0.8 -0.8 -1.4 -1.9 -1.8 -2.5 -3.6 -3.3 -0.9 -1.2 -1.4 -1.1 0.0090 1.5 -1.6 -1.3 -0.05 0.2 -0.2 3653 IPW - 1 1.3 0.1 1.0 -0.4 0.9 1.3 -0.8 4.3 0.2 0.4 -0.7 -0.4 -1.0 -1.0 1.6 -0.3 -0.4 -0.5 -0.2 0.1 -3.0 -0.6 5745 PTHR1 - 1 0.8 0.6 0.4 0.08 0.9 1.4 -1.1 1.2 2.3 3.3 -1.0 -0.3 -1.0 -0.5 -0.2 -0.9 -1.6 -1.4 -1.6 -0.1 -1.7 0.01 -4.5 0.2 64397 ZFP106 - 1 1.3 1.6 0.3 1.2 0.4 -0.09 0.1 2.2 -0.3 -0.3 -0.8 -1.0 -1.3 -0.4 -0.3 -0.5 -1.4 -1.0 -1.2 1.2 0.2 0.5 0.05 -0.4 -0.1 2006 ELN - 1 1.8 0.2 0.06 -0.4 -0.5 2.0 -0.5 -0.9 -1.2 -1.6 -1.6 -1.6 -1.5 -1.6 1.1 0.3 79742 79742 1 1.6 1.0 -0.04 0.7 0.3 0.6 1.3 -1.2 -0.7 -0.7 -0.6 -1.1 -0.2 -1.3 0.2 0.06 -0.4 -0.07 8701 DNAH11 - 1 1.2 0.9 1.3 0.4 0.5 0.2 1.5 -0.9 -0.8 -0.5 -0.4 -1.0 -0.5 0.1 -1.3 -3.1 -1.4 -2.2 -1.2 0.7 -0.1 0.1 -0.1 80853 80853 1 1.1 2.0 0.6 0.5 0.1 1.0 0.4 3.1 -0.2 -0.5 -0.6 -0.3 -0.6 -0.7 0.1 -1.5 2.4 0.1 -1.5 -0.9 0.2 0.05 -0.1 -1.0 -1.2 84320 ACBD6 - 1 1.4 1.7 0.1 0.05 0.2 0.3 1.8 -1.3 -1.0 -0.3 -0.09 -1.0 -0.6 0.1 1.8 -1.3 -0.4 -1.0 0.01 2119 ETV5 - 1 1.3 2.1 1.6 1.0 0.9 -0.5 -0.4 2.3 -0.8 -0.2 -0.8 -0.4 -1.3 -2.0 -0.7 -0.2 0.5 -2.3 -2.0 -0.5 -1.0 -0.09 0.4 -1.0 -0.0090 -0.2 -0.0040 -1.2 -0.5 9173 IL1RL1 - 1 -0.6 0.5 0.9 0.7 0.5 0.3 0.09 1.5 0.1 0.4 -1.3 -0.6 -1.3 -0.1 -0.6 -0.4 0.4 -2.0 -1.2 -1.8 1.9 -0.3 -1.5 -1.2 -1.1 -0.3 0.3 1.2 0.4 9118 INA - 1 -0.6 1.3 -0.3 0.1 0.4 0.9 0.2 1.9 0.3 -0.1 -1.0 -0.3 -1.6 -1.0 -1.6 1.3 1.5 0.2 -0.2 0.2 1.1 -0.7 57409 57409 1 0.1 1.1 0.9 0.7 0.8 1.1 -0.4 1.7 0.1 0.03 -0.9 -0.3 -1.4 -0.4 -1.2 -0.3 -0.4 -1.0 0.04 0.2 -0.08 0.7 -1.0 410 ARSA - 1 0.04 0.2 1.3 1.1 1.0 1.2 -0.3 1.3 0.1 1.3 -0.7 -0.6 -1.3 0.06 -0.2 -1.2 -1.5 -0.6 -1.5 -2.6 -1.3 -0.9 -1.8 -0.02 0.3 -0.6 1793 DOCK1 - 1 0.7 0.3 0.05 0.6 0.8 0.8 0.9 -0.7 0.2 -0.5 -0.5 -1.5 0.1 -0.1 -1.7 -1.3 -1.1 -1.0 -2.9 -0.1 0.2 -1.4 0.2 -0.3 9796 PHYHIP - 1 1.2 0.8 0.1 0.9 0.5 0.8 1.4 1.4 -0.1 -0.1 -1.0 -0.4 -1.6 0.4 -2.1 -1.5 -1.1 0.1 -1.7 -2.1 0.02 -2.0 -0.6 -1.3 -0.1 -0.8 92591 ASB16 - 1 0.7 0.2 0.4 0.4 0.7 0.2 -0.5 -1.0 -1.0 -0.7 -1.2 -0.7 3633 INPP5B - 1 -0.8 1.0 0.1 0.1 0.5 0.5 1.0 1.3 0.4 -0.9 -0.4 -1.0 0.03 -1.2 -1.4 -0.09 -3.9 -0.5 55041 PLEKHB2 - 1 0.7 -0.1 0.6 0.5 1.2 1.6 -0.8 -0.6 -1.2 -0.3 -1.6 -0.4 7178 TPT1 - 1 -1.5 0.5 0.3 0.6 0.7 0.8 0.1 1.5 0.3 -0.5 -1.1 -0.8 -1.1 -0.3 -0.1 0.05 -0.1 0.6 -0.5 -0.0060 -1.1 -0.2 -2.2 -0.6 6301 SARS - 1 -0.6 0.9 -0.1 0.1 1.4 0.5 1.0 1.1 0.09 -0.06 -0.9 -0.3 -1.1 0.2 -0.2 -1.0 0.05 -0.4 -1.1 -0.4 0.4 1.4 -1.5 -1.1 -0.8 0.3 23381 23381 1 -0.1 0.2 0.9 1.2 0.1 0.9 -0.09 3.5 -0.8 -0.3 -0.7 -1.0 -0.9 -0.5 3.0 -0.5 0.8 -1.1 -0.4 -0.1 -0.3 -0.4 11194 ABCB8 - 1 1.0 0.3 0.6 0.04 0.2 2.3 1.9 -0.7 -0.1 -1.0 -1.0 -0.6 -0.1 -0.1 -0.07 -0.1 -0.8 -0.1 -0.8 -0.3 0.5 -1.3 10062 NR1H3 - 1 0.9 -1.0 1.8 1.0 -0.02 0.6 1.4 2.9 -0.3 -0.2 -1.0 -0.8 -0.6 -1.0 -1.0 -1.1 -1.2 0.8 -1.1 -1.5 -0.5 -0.6 -0.3 -0.6 -0.1 0.05 0.1 -0.3 -1.5 8351 HIST1H3D - 1 1.4 -0.04 0.9 -0.4 1.1 1.0 1.1 2.3 -0.2 0.1 -0.7 -0.01 -1.3 -0.5 -0.5 -0.9 -0.5 -0.02 -0.5 -1.4 -0.1 0.1 -1.0 -0.7 51773 HBXAP - 1 1.3 0.09 0.7 0.5 1.1 1.0 1.4 -0.5 -0.3 -0.8 0.1 -1.1 -0.3 -0.3 -0.7 -1.1 -0.2 -0.5 -0.3 0.1 -0.05 -1.4 -1.5 3231 HOXD1 - 1 -0.9 -0.3 1.0 0.4 0.6 -0.2 2.0 0.5 -0.3 -0.4 0.1 -1.0 -0.7 -0.7 -0.4 -0.07 -0.7 -1.3 -0.7 -0.8 -0.7 -0.1 -0.5 -1.2 90338 ZNF160 - 1 0.3 1.0 1.2 1.1 0.3 -0.02 2.1 0.3 -0.9 -0.4 -0.4 -0.2 -1.1 -0.3 -0.4 -1.1 -0.2 -1.1 0.4 -0.4 0.4 -1.9 -0.8 57468 SLC12A5 - 1 1.0 1.2 0.8 1.1 0.2 0.3 1.9 1.2 -1.3 -0.8 -0.7 -0.8 -0.2 -0.2 -1.1 -0.8 -0.2 0.7 -0.2 -1.1 -0.4 0.3 -1.0 -1.6 7472 WNT2 - 1 0.2 1.0 1.0 0.3 0.2 -0.2 1.0 1.6 -0.6 -1.1 -1.0 -0.6 -1.5 -1.5 -3.5 -2.0 -1.3 0.4 -1.9 -0.4 0.1 0.07 -0.1 -2.3 -2.1 10677 AVIL - 1 1.3 0.5 -0.09 0.2 -0.4 -0.01 -0.03 1.1 0.07 -0.3 -0.6 -0.6 -0.6 -0.8 -0.2 -1.8 -0.8 -1.7 1.8 -1.2 -0.6 -1.3 -0.4 2.9 54879 ST7L - 1 0.8 0.4 0.6 0.1 1.5 0.0050 -0.7 1.6 -0.4 -0.5 -0.8 -1.2 -0.9 -0.7 -5.1 -1.7 -1.2 -1.2 -1.2 -1.3 0.2 -0.05 0.3 -1.2 -0.4 54537 54537 1 0.02 1.0 0.4 0.5 0.2 -0.1 1.0 0.1 -0.2 -0.1 -0.5 -0.6 -1.1 -1.6 -0.7 0.2 4.0 0.4 9320 TRIP12 - 1 0.2 1.0 0.7 0.4 -0.2 0.2 0.05 2.5 0.3 0.2 -0.6 -0.5 -0.8 -1.5 -0.4 0.03 -0.09 0.9 -1.7 -1.5 -1.7 0.3 -1.2 0.6 1.5 0.2