GENE NAME GWEIGHT Chen02_Liver_HBV_HK42 Chen02_HCC_HBV_SF35_1 Ramaswamy01_Tumor__Mesothelioma_224_T5 Chen02_Liver_SF36 Chen02_Liver_HBV_HK85 Chen02_HCC_HBV_HK21 Chen02_Liver_SF5 Ramaswamy01_Tumor__Bladder_TCC_B_0004 Garber01_223_97_Adeno Sorlie01_BC40 Garber01_184_96_Adeno Garber01_184_96_node Garber01_218_97_Adeno Garber01_139_97_LCLC Staunton01_NSCLC_A549ATCC Perou00_T47D Ross00_COLO205_CL4010_COLON Garber01_234_97_Adeno Staunton01_NSCLC_NCIH226 Ross00_NCI_H226_CL1013_NSCLC Ramaswamy01_Tumor__Renal_Carcinoma_Carc_623TO Chen02_Hep3B_cells Chen02_Met_Colon_Cancer_SF5 Ramaswamy01_Tumor__Renal_Carcinoma_Carc_623TS Chen02_Liver_HBV_SF34 Chen02_Met_Colon_Cancer_SF37 Alizadeh00_DLCL_0049 Sorlie01_BC_A Ross00_MCF7D_repro Ross00_RPMI_8226_CL7010_LEUKEMIA Singh02_N27__normal Ross00_NCI_H322_CL1017_NSCLC Garber01_161_96_Adeno Garber01_319_00PT_Adeno Ross00_EKVX_CL1008_NSCLC Cuadras02_Infection_1_RRVa_16h_vs_mocka16h Cuadras02_Infection_3_RRVb_16h_vs_mocka_16h Cuadras02_Infection_2_RRVb_16h_vs_mockb_16h Bhattacharjee01_SQ-6147-A329-5 Garber01_245_97_SCC Bhattacharjee01_SQ-3197-A323-5 Bhattacharjee01_SQ-SQ13t1-A364-6 Bhattacharjee01_AD-234t1 dup -A155-4 Bhattacharjee01_SQ-4389-A327-5 Bhattacharjee01_AD-341t1a-A123-3 * Singh02_N25__normal Singh02_N33__normal Singh02_N14__normal Garber01_75_95_combined Garber01_246_97_SCC_c Garber01_219_97_SCC Garber01_220_97_SCC Garber01_220_97_node Garber01_232_97_SCC Garber01_58_95_SCC Garber01_42_95_SCC Golub99_ALL_R11_B-cell Garber01_3_00_SCC Sorlie01_BC307B_BE Sorlie01_BC702B_BE Sorlie01_BC608B_BE Sorlie01_BC406A_2ndTUMOR Ross01_HME31 Garber01_166_96_SCC Perou00_HMEC_C Perou00_184A1_LATE Perou00_HMEC_C_Confluent Perou00_184B5 Perou00_184Aa Ramaswamy01_Tumor__Lung_Adeno_95_I_117 Garber01_69_96_Adeno Sorlie01_BC706A_BE Staunton01_OVAR_OVCAR3 Sorlie01_BC48_0 Ross00_OVCAR_4_CL6002_OVARIAN Sorlie01_BC6 Pomeroy02_Brain_Ncer_4 Ross00_Breast_Tumor_2_X_NCI_reference Singh02_N13__normal Singh02_T21__tumor Armstrong01_AML_17 Ross01_HCC_1937 Shipp02_FSCC14 Shipp02_FSCC16 Chen02_SNU475_cells Chen02_Hep40_cells Armstrong01_AML_26 Chen02_SNU182_cells Chen02_SNU423_cells Whitfield02_10h_Thy_Noc_Exp4 Whitfield02_0h_Thy_Noc_Exp4 Detweiler01_E3_U937_wild_type_1hc Detweiler01_E3_U937_phoP_4hb Whitfield02_6h_Thy_Noc_Exp4 Whitfield02_4h_Thy_Noc_Exp4 Whitfield02_8h_Thy_Noc_Exp4 Bhattacharjee01_SQ-SQ14t1-A365-6 Bhattacharjee01_SQ-4172-A326-5 Bhattacharjee01_SQ-2557-A320-5 Bhattacharjee01_SQ-1174-A317-5 Bhattacharjee01_SQ-3624-A325-5 Bhattacharjee01_SQ-3529-A324-5 Bhattacharjee01_SQ-SQ20t1-A366-6 Bhattacharjee01_AD-295t1-A105-3 Bhattacharjee01_SQ-2921-A322-5 Bhattacharjee01_SQ-SQ5t1-A359-6 Bhattacharjee01_SQ-1670-A318-5 Bhattacharjee01_AD-375t1-A115-3 * Bhattacharjee01_AD-164t1a-A206-8 * Bhattacharjee01_AD-355t2-A174-4 Bhattacharjee01_AD-183t1-A215-8 * Bhattacharjee01_AD-167t1 d dup -A210-8 * Bhattacharjee01_AD-114T1-A9-1 * Bhattacharjee01_AD-201t1-A138-4 Bhattacharjee01_AD-185t2-A232-8 Shipp02_DLBC42 Bhattacharjee01_AD-119t3-A195-8 Bhattacharjee01_AD-AD4T1-A386-7 Bhattacharjee01_AD-136t2-A201-8 Bhattacharjee01_AD-157T1-A246-10 * Bhattacharjee01_AD-130T1-A1-1 Bhattacharjee01_AD-225t1-A150-4 Bhattacharjee01_AD-327t1-A276-10 * Bhattacharjee01_AD-212t1-A145-4 Bhattacharjee01_AD-379t1-A116-3 * Bhattacharjee01_AD-277t1-A97-3 Bhattacharjee01_AD-177T1-A21-1 Bhattacharjee01_NL-4353-A334-6 Bhattacharjee01_AD-363t1-A283-10 Bhattacharjee01_AD-255t1a-A169-4 ** Bhattacharjee01_NL-3681-A332-6 Bhattacharjee01_NL-1179-A408-7 Bhattacharjee01_AD-356t1-A175-4 Bhattacharjee01_NL-2378-A412-7 Bhattacharjee01_NL-7530-A338-6 Bhattacharjee01_AD-122t3-A197-8 Bhattacharjee01_AD-318t3-A107-3 Bhattacharjee01_AD-120t1-A226-8 * Bhattacharjee01_AD-208t1-A143-4 Bhattacharjee01_AD-207t1-A142-4 Bhattacharjee01_AD-283t1-A99-3 Bhattacharjee01_AD-249t1x d -A165-4 Bhattacharjee01_AD-252t1-A167-4 Bhattacharjee01_COID-4385-A301-5 Bhattacharjee01_AD-159t1-A229-8 Bhattacharjee01_AD-158t1-A247-10 * Bhattacharjee01_AD-382t1-A117-3 * Bhattacharjee01_AD-360t1-A176-A406 Bhattacharjee01_AD-296t21-A106-03 * Bhattacharjee01_AD-163t1-A203-8 * Bhattacharjee01_AD-111T2-A8-1 Bhattacharjee01_AD-301t1-A237-8 * Bhattacharjee01_AD-228t2-A152-4 * Bhattacharjee01_AD-188t1-A216-8 Bhattacharjee01_AD-213t1-A146-4 Bhattacharjee01_AD-043T2-A7-1 Bhattacharjee01_AD-334t1 d dup -A221-8 * Bhattacharjee01_AD-320t1-A272-10 Bhattacharjee01_AD-314t1-A269-10 Bhattacharjee01_AD-115T1-A12-1 * Bhattacharjee01_AD-384t1-A120-3 * Bhattacharjee01_AD-276t1 dup b4 -A96-3 * Bhattacharjee01_AD-337t1-A224-8 Bhattacharjee01_AD-332t1-A220-8 Bhattacharjee01_AD-240t1-A159-4 Bhattacharjee01_AD-368t2-A285-10 Bhattacharjee01_AD-268t1 dup b4 -A93-3 ** Bhattacharjee01_AD-267t1-A91-3 Bhattacharjee01_AD-AD19T1-A393-7 Bhattacharjee01_AD-317t1-A271-10 Bhattacharjee01_NL-1884-A411-7 Bhattacharjee01_NL-6853-A336-6 Bhattacharjee01_AD-232t1-A154-4 Bhattacharjee01_AD-311t1-A266-10 * Bhattacharjee01_AD-127T1-A14-1 Bhattacharjee01_AD-259t1-A171-4 Bhattacharjee01_SMCL-SMCL9t1-A357-6 Bhattacharjee01_NL-4083-A333-6 Bhattacharjee01_NL-3104-A331-6 Bhattacharjee01_NL-6084-A335-6 Bhattacharjee01_NL-2562-A413-7 Bhattacharjee01_NL-6943-A337-6 Bhattacharjee01_AD-266t1-A90-3 Bhattacharjee01_AD-262t1a-A259-10 * Garber01_315_99_node Bhattacharjee01_SMCL-SMCL3t1-A290-10 Perou00_BT_549 Garber01_314_99_SCLC Perou00_Hs578T_NCI Garber01_256_97_LCLC Perou00_SW872 Perou00_BC118A_AF Garber01_222_97_Adeno Garber01_226_97_Adeno Perou00_MDA_MB_231_NCI Garber01_248_97_LCLC Staunton01_NSCLC_HOP92 Perou00_NB4_ATRA Ross01_BJ_hTERT_PD210_Fibroblasts_UTSW Ross01_HMS32 Ross00_SR_CL7019_LEUKEMIA Garber01_219_97_normal Armstrong01_ALL_18 Ramaswamy01_Normal__Germinal_Center_GC2 Perou00_RPMI_8226 Ramaswamy01_Normal__Whole_Brain_BRAIN_3 Staunton01_RENAL_7860 Ross00_HOP_92_CL1029_NSCLC Ross00_MDA_N_CL5012_BREAST Ross00_MDA_MB_435_CL5011_BREAST Staunton01_MELAN_SKMEL5 Staunton01_CNS_SF539 Staunton01_LEUK_CCRFCEM Staunton01_MELAN_UACC62 Staunton01_MELAN_SKMEL28 Staunton01_MELAN_M14 Staunton01_BREAST_MDAMB435 Staunton01_RENAL_RXF393 Staunton01_MELAN_UACC257 Ramaswamy01_Tumor__Melanoma_MGH_11511 Ramaswamy01_Tumor__Melanoma_96_I_166 Ramaswamy01_Tumor__Melanoma_MGH_7974 Ramaswamy01_Tumor__Melanoma_0-9652 Bhattacharjee01_AD-AD31-A289-10 Bhattacharjee01_AD-287t1-A101-3 Bhattacharjee01_NL-268n1-A92-3 Bhattacharjee01_SQ-SQ6t1-A360-6 Bhattacharjee01_SQ-5897-A328-5 Ramaswamy01_Tumor__Lymphoma_Large_B-Cell_L_B_CELL_S98_12453_R Ramaswamy01_Normal__Uterus_UT_3 Ramaswamy01_Tumor__CNS_Glioblastoma_GlioB_10 Ramaswamy01_Tumor__CNS_Glioblastoma_GlioB_1 Ramaswamy01_Tumor__CNS_Glioblastoma_GlioB_7 Ramaswamy01_Tumor__CNS_Medulloblastoma_M33 Perou00_BC38_LN38 Singh02_T37__tumor Sorlie01_BC111A_BE Perou00_BC124B_AF Ross00_LOXIMVI_CL10001_MELANOMA Garber01_237_97_Adeno Garber01_180_96_Adeno Sorlie01_BC107B_BE Garber01_181_96_Adeno Garber01_156_96_Adeno Nutt03_Brain_CG_11 Nutt03_Brain_CG_6 Garber01_191_96_Adeno Bhattacharjee01_AD-346t1a-A124-3 * Ross00_SNB_19_CL12002_CNS Ross00_UACC_62_CL10020_MELANOMA Shipp02_DLBC34 Lessnick02_Run 2, Day 0 Iyer99_Serum_01 Chen02_HCC_HBV_HK66_T2 Singh02_T15__tumor Garber01_222_97_normal Garber01_315_99_normal Chen02_HCC_HBV_HK64_T2 Chen02_HCC_HBV_HK38 Chen02_HCC_HBV_HK56 Sorlie01_BC807A_BE Ross01_Hs578T_ATCC Garber01_230_97_SCLC Garber01_207_97_SCLC Garber01_165_96_Adeno Garber01_299_99_Adeno Whitfield02_1_hr_Hela_Double_Thymidine_exp2 Whitfield02_7_hr_Hela_Double_Thymidine_exp2 Whitfield02_5_hr_Hela_Double_Thymidine_exp2 Whitfield02_9_hr_Hela_Double_Thymidine_exp2 Whitfield02_20_hr_Hela_Double_Thymidine_exp2 Whitfield02_40_hr_Hela_Double_Thymidine_exp2 Cuadras02_Tc_control Singh02_T02__tumor Detweiler01_E6_U937_mock_2h Singh02_N05__normal Singh02_T05__tumor Singh02_N45__normal Singh02_N43__normal Singh02_T20__tumor Singh02_T03__tumor Singh02_N34__normal Singh02_T18__tumor Singh02_T26__tumor Detweiler01_E6_U937_wild_type_3h Detweiler01_E6_U937_wild_type_1h Detweiler01_E6_U937_phoP_3h Detweiler01_E6_U937_mock_1h Detweiler01_E6_U937_mock_4h Singh02_T17__tumor Singh02_N06__normal Singh02_T34__tumor Singh02_T53__tumor Singh02_T10__tumor Singh02_T58__tumor Singh02_N38__normal Singh02_T32__tumor Singh02_T54__tumor Singh02_T45__tumor Singh02_N60__normal Singh02_N32__normal Singh02_T41__tumor Singh02_N53__normal Singh02_N39__normal Singh02_T28__tumor Singh02_N55__normal Singh02_N59__normal Singh02_N58__normal Singh02_N62__normal Singh02_T55__tumor Singh02_T56__tumor Singh02_T60__tumor Singh02_N61__normal Singh02_N01__normal Singh02_T43__tumor Singh02_T40__tumor Singh02_T31__tumor Singh02_T62__tumor Singh02_T01__tumor Singh02_T59__tumor Singh02_T57__tumor Singh02_T47__tumor Singh02_T04__tumor Singh02_T29__tumor Singh02_T16__tumor Singh02_T30__tumor Singh02_T38__tumor Singh02_T39__tumor Singh02_T24__tumor Singh02_N46__normal Singh02_N37__normal Singh02_N40__normal Singh02_N54__normal Singh02_N16__normal Singh02_N47__normal Singh02_N42__normal Bhattacharjee01_AD-352t1-A128-3 Bhattacharjee01_COID-COID10t1-A347-6 Bhattacharjee01_COID-COID7t1-A344-6 Bhattacharjee01_COID-COID14t1-A351-6 Bhattacharjee01_COID-1429-A303-5 Bhattacharjee01_COID-COID11t1-A348-6 Bhattacharjee01_AD-186T1-A27-1 Bhattacharjee01_COID-COID18t1-A353-6 Bhattacharjee01_COID-COID9t1-A346-6 Bhattacharjee01_COID-COID3t1-A340-6 Bhattacharjee01_COID-3580-A302-5 Bhattacharjee01_COID-COID4t1-A341-6 Bhattacharjee01_SMCL-SMCL4t1-A354-6 Bhattacharjee01_SMCL-301-A306-5 Bhattacharjee01_COID-COID8t1-A345-6 Bhattacharjee01_AD-224t1-A149-4 Bhattacharjee01_COID-COID13t1-A350-6 Bhattacharjee01_COID-COID12t1-A349-6 Bhattacharjee01_COID-COID16t1-A352-6 Bhattacharjee01_COID-9794-A300-5 Bhattacharjee01_COID-COID5t1-A342-6 Bhattacharjee01_SMCL-SMCL8t1-A356-6 Bhattacharjee01_COID-2260-A304-5 Bhattacharjee01_COID-4518-A305-5 Bhattacharjee01_AD-AD5T1-A387-7 Bhattacharjee01_AD-340t1a-A122-3 * Bhattacharjee01_AD-351t1-A127-3 Bhattacharjee01_AD-338t1a-A121-3 * Bhattacharjee01_AD-315t1-A270-10 Bhattacharjee01_AD-172t2-A213-8 * Bhattacharjee01_AD-347t1a-A125-3 * Bhattacharjee01_AD-179t1 d dup -A214-8 * Bhattacharjee01_NL-279n1-A98-3 Bhattacharjee01_AD-353t1-A129-3 Bhattacharjee01_AD-202t2-A139-4 Bhattacharjee01_AD-221t1-A148-4 Bhattacharjee01_AD-285t2c-A263-10 Bhattacharjee01_AD-367t1-A110-3 Bhattacharjee01_AD-350t1a-A126-3 * Bhattacharjee01_AD-203t1-A140-4 * Bhattacharjee01_AD-309t1-A242-8 Bhattacharjee01_AD-243t1x-A161-4 * Bhattacharjee01_AD-269t1-A94-3 Bhattacharjee01_AD-294t1 dup b4 -A104-3 * Bhattacharjee01_AD-210t1-A144-4 Bhattacharjee01_NL-1698-A410-7 Bhattacharjee01_AD-226t2-A151-4 3868 KRT16 - 1 0.1 -0.6 0.5 -0.2 0.8 0.8 0.9 0.6 1.1 0.7 2.6 2.7 0.2 1.0 2.7 3.6 0.1 -0.2 0.7 0.8 0.1 -1.8 0.03 -2.0 0.2 -0.7 0.1 0.01 -0.6 0.08 -1.1 -0.5 -0.3 0.4 -0.9 0.3 -3.9 -1.0 -2.1 -1.9 -1.2 -1.8 -1.6 -2.7 -1.6 -0.6 -1.3 1832 DSP - 1 0.06 -0.02 0.3 0.3 0.3 0.6 -1.3 2.9 2.1 0.9 0.5 2.7 2.9 -0.6 2.0 1.0 -0.3 -0.6 2.7 3.0 1.2 1.0 1.2 1.2 1.5 -0.3 -0.1 -0.1 1.3 0.4 1.2 1.3 0.2 0.9 -0.6 -0.2 0.9 -0.2 0.5 1.1 2.8 1.4 1.1 1.2 1.6 1.7 1.2 0.2 2.8 2.6 3.0 3.8 3.2 -1.1 -0.8 -0.9 0.02 -1.8 -1.4 -0.9 -0.2 -4.0 0.1 0.1 0.9 1.8 0.4 0.4 0.2 1.7 1.7 2.2 1.9 1.9 1.8 1.0 1.1 0.5 1.4 1.4 -0.4 -0.01 -1.5 -1.5 -0.9 -1.3 -1.7 -0.7 -4.2 -3.3 -1.9 0.6 -0.5 0.1 -1.2 -4.2 -0.7 0.1 0.07 -1.7 -1.3 1.0 -4.2 -4.2 -4.2 -2.6 -3.4 -1.3 -1.4 0.5 -2.9 -2.2 -1.4 0.1 0.3 0.2 0.7 0.6 0.4 -2.4 -3.2 0.4 -0.09 0.9 -0.4 -2.3 -2.8 1.0 0.7 -0.4 0.0050 0.9 0.2 -0.4 -0.3 -0.3 -0.5 -0.4 -0.6 -3.6 -4.2 -1.8 -4.2 -2.2 -2.2 -2.5 -1.3 -3.2 -1.7 -2.4 -4.0 -2.1 -2.8 -2.9 -2.5 -1.3 0.04 -0.6 1.5 -3.5 0.8 0.7 -0.6 -1.0 -1.2 -2.5 -1.8 -0.9 -5.1 -2.8 -3.3 -4.2 -3.0 -3.0 0.4 0.8 0.4 -1.5 -1.6 -1.0 0.01 -3.6 -0.01 -0.01 -3.5 -1.1 -1.6 -2.4 0.1 -0.4 1.1 -0.06 -1.1 -1.5 0.2 1.0 0.8 -1.3 0.9 1.6 1.0 1.1 -0.5 0.07 -0.02 0.04 -0.02 0.1 -0.1 -1.4 -1.8 -1.2 -1.6 -0.7 -1.9 0.1 0.6 0.1 -1.4 -1.2 -1.1 -1.1 -1.7 -1.7 -0.7 -1.2 -1.2 0.6 -0.8 -0.1 0.1 0.3 0.2 -0.5 -0.1 -0.1 0.5 -0.1 0.6 0.9 0.8 0.3 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