GENE NAME GWEIGHT Perou99_HMEC_X_BC2_2 Iyer99_Serum_06 Perou99_HMEC_X_BC790 Singh02_N58__normal Singh02_N59__normal Singh02_N39__normal Singh02_N32__normal Singh02_T28__tumor Chen02_Liver_HBV_HK21 Chen02_Liver_HBV_HK30 Chen02_HCC_HBV_HK29 Chen02_HCC_HBV_SF32 Chen02_Adenoma_HK73 Staunton01_LEUK_K562 Armstrong01_ALL_5 Ramaswamy01_Normal__Prostate_PR_7 Ramaswamy01_Normal__Prostate_PR_2 Chen02_HCC_HBV_HK60 Chen02_Liver_SF9 Chen02_Liver_SF11 Chen02_Liver_HBV_HK33 Chen02_Liver_SF10 Chen02_Liver_HBV_SF35 Chen02_Liver_SF8 Chen02_Liver_HBV_HK14 Chen02_Liver_HK2 Chen02_FNH_SF33 Perou99_HMEC_X_Hs578t Perou99_HMEC_X_BC23_0090_5k Perou99_HMEC_X_BC1498 Perou99_HMEC_X_HB2_0164 Ramaswamy01_Normal__Kidney_Norm_627 Perou99_HMEC_X_BC1369 Ramaswamy01_Normal__Kidney_KT_3 Chen02_HCC_HBV_CH3 Chen02_Met_Granulosa_Cell_Tumor_SF39_T2 Ramaswamy01_Tumor__Leukemia_AML_AML_ 2,PK _BM Chen02_Endometrial_Stromal_Sarcoma_SF26 Chen02_HCC_HBV_SF27 Chen02_HCC_Fibrolamellar_SF13 Chen02_HCC_HBV_HK11 Chen02_HCC_HBV_HK64_T7 Chen02_Hep3B_cells Chen02_HCC_HCV_SF30 Chen02_HCC_HBV_HK27 Ramaswamy01_Tumor__Lymphoma_Large_B-Cell_L_B_CELL_S93_04233_Y Iyer99_Unsynchronized_cyc Iyer99_Serum_cyc_0_5 Perou99_HMEC_X_NB2 Chen02_SNU475_cells Chen02_SNU182_cells Chen02_SNU387_cells Sorlie01_BC46_LN46 Ross01_MDA_MB_231_UTSW Perou99_HMEC_X_Senescent_HMEC_2 Perou99_HMEC_control_X_HMEC_Interferon_gamma_24hrs Perou99_HMEC_X_Confluent_HMEC Perou99_HMEC_X_HMEC_Interferon_alpha_24hrs Perou99_HMEC_X_HMEC_EGF_for_2days Perou99_HMEC_X_HMEC_TGFbeta_24hrs 2547;91749 2547;91749 1 0.5 0.2 0.3 0.04 -0.9 -0.2 -0.5 -0.04 0.3 0.04 0.1 0.3 0.2 -0.4 0.07 0.07 -0.08 0.1 1.1 0.7 2.0 2.0 1.5 0.2 -0.4 -1.3 -1.1 0.2 0.4 0.1 0.3 0.09 0.0020 0.03 0.1 -0.9 -0.08 -0.05 -0.8 0.7 0.3 -1.2 -1.1 -1.2 -1.1 0.4 2.2 84303 84303 1 1.2 0.5 1.2 0.2 1.7 1.0 1.9 -0.7 -1.2 -1.2 -0.9 0.3 -2.5 1.6 53 ACP2 - 1 0.4 0.8 -0.5 1.5 1.4 1.0 0.3 1.1 0.3 0.3 0.9 0.7 0.2 1.1 1.0 0.1 0.3 0.7 -0.05 0.1 0.4 -0.1 -0.1 -0.1 0.6 1.1 1.8 2.4 3.0 -0.4 -0.8 -2.0 -0.2 -1.8 -0.3 -0.8 0.9 -0.2 0.2 -1.9 0.07 0.2 -1.1 -0.8 -1.0 -0.3 -0.8 -0.7 -1.2 -1.5 -0.8 -1.5 -1.1 10347 ABCA7 - 1 1.2 -0.0080 1.2 -0.2 0.1 0.6 -0.7 -1.0 -0.1 -0.3 -0.2 -1.2 -0.9 -0.7 -0.05 -0.4 -0.09 2.4 2.1 1.1 3.1 0.8 0.1 0.1 0.1 0.2 0.8 0.2 -0.05 0.4 -0.0020 -0.7 -1.1 -1.6 -1.2 -1.8 -1.3 -0.8 -1.5 -1.3 -0.8 -1.3 -0.2 25915 25915 1 0.3 1.0 -0.1 -0.4 -0.06 0.1 -0.2 1.5 -0.2 0.3 0.1 -0.4 -0.8 -0.2 0.08 -0.3 -0.5 1.0 0.9 1.8 1.9 2.4 0.5 1.1 0.03 0.5 1.7 0.1 -0.1 0.1 -0.01 -0.1 0.07 -0.2 -1.3 0.03 -1.1 -1.6 -0.8 -2.0 -1.1 -1.2 -0.1 -1.5 55041 PLEKHB2 - 1 0.5 0.4 -0.5 0.6 -0.1 -0.4 1.6 -1.6 -0.6 -1.2 -0.4 -0.8 -0.4 -0.4 57409 57409 1 0.8 -0.3 1.0 0.2 -0.1 0.3 -0.3 -0.5 0.2 0.2 0.2 0.03 0.2 0.01 0.1 0.1 0.2 0.2 -0.2 0.7 0.9 -0.3 1.7 -0.8 -0.3 0.3 0.06 -0.2 0.1 -1.0 0.1 -0.06 -0.3 -0.3 0.07 -1.0 0.2 -0.3 -1.1 0.09 -0.3 -1.4 -0.9 -0.9 -0.4 -1.0 23144 23144 1 0.4 0.2 0.5 -0.2 0.6 1.2 -0.4 1.9 -0.1 0.08 -0.7 -0.7 -1.2 -1.1 -0.8 -2.4 0.4 1407 CRY1 - 1 0.2 -0.0070 1.0 -0.4 -0.4 0.3 -0.1 -0.3 1.2 1.4 -1.0 0.04 0.5 -0.1 0.5 0.3 0.1 0.5 0.2 -0.2 0.1 -0.6 1.2 1.0 -0.4 1.2 2.4 -1.9 1.5 0.1 -1.9 -1.3 -0.1 0.5 -0.09 0.3 0.7 0.1 -1.2 -1.9 0.2 -0.1 -0.02 0.5 -0.6 0.1 0.2 0.01 -1.1 -1.0 -0.8 -1.0 -0.7 -2.0 84527 84527 1 0.5 -0.7 0.4 1.0 1.1 1.7 2.0 3.5 0.2 0.4 0.7 -1.0 -1.6 -0.7 -1.0 -2.1 -1.2 6647 SOD1 - 1 0.3 -0.2 1.0 0.3 0.2 0.09 0.3 0.1 0.6 0.1 0.5 0.1 0.5 -0.05 1.1 1.1 0.1 0.2 0.8 0.5 0.2 0.5 0.6 1.2 0.8 0.8 0.9 1.5 1.2 1.3 2.6 1.8 1.8 1.6 -1.7 -1.1 -0.2 -1.4 -1.3 -0.9 -1.6 -0.7 -2.2 -0.8 0.8 -1.0 0.2 -0.1 0.2 -1.1 -1.2 -2.6 1.9 -0.1 -1.0 -1.9 -0.8 -1.0 -2.0 -1.2 2819 GPD1 - 1 1.3 1.1 1.2 -0.1 -0.1 -0.1 -0.1 -0.1 0.1 1.2 0.5 0.2 1.8 -0.2 0.4 0.9 1.0 0.7 0.4 1.1 0.7 0.7 0.9 1.1 1.1 0.9 1.6 1.1 2.2 -0.9 -0.6 -1.0 -0.3 -0.6 -1.0 -1.1 -0.9 -0.1 -0.7 -0.08 -1.1 -0.08 -0.8 -1.2 -0.8 -1.2 0.3 -1.5 -1.9 -1.3 -1.4 -0.4 -2.0 55177 55177 1 1.1 0.4 0.1 2.1 1.4 1.6 0.5 0.8 0.4 0.1 -0.1 -0.09 -2.0 -1.6 -1.5 -1.0 -1.5 3126 HLA-DRB4 - 1 1.4 0.6 -1.2 -0.2 -1.3 -0.2 -0.1 -0.2 0.1 0.4 0.5 -0.2 0.1 -0.4 -0.1 -0.09 -0.1 -0.4 0.06 -0.1 -0.4 0.02 0.1 1.1 1.4 1.8 1.1 0.7 0.6 -1.3 -0.07 0.6 -0.1 0.9 0.2 1.1 0.5 0.1 -1.5 0.3 0.0010 -0.04 0.2 0.1 -1.6 -1.7 -1.6 -3.1 -1.7 3151 HMGN2 - 1 1.4 1.6 0.7 0.1 0.1 0.4 -0.07 -1.2 -1.4 -0.1 -0.8 -0.1 -0.6 -0.7 0.2 0.2 0.6 0.8 0.7 1.2 1.8 0.8 1.1 0.7 -1.5 -1.7 0.4 -0.4 0.3 0.3 -0.8 1.1 -0.3 -1.0 -1.4 -1.0 1.2 0.5 1.0 -0.2 1.0 -0.2 -1.6 -2.0 -1.7 -1.5 -2.1 1952 CELSR2 - 1 0.6 0.04 -1.1 -1.1 -0.8 -0.2 -0.6 0.1 0.1 1.4 1.9 1.0 1.4 -0.2 -0.08 -0.5 0.3 2.5 1.5 0.3 1.1 -0.01 0.7 -0.8 -0.6 -0.07 1.5 1.4 2.0 2.7 1.1 1.5 1.4 1.5 -2.2 -3.1 -1.2 -0.7 -0.6 -0.5 0.5 1.6 1.5 0.3 -1.1 -0.7 1.3 1.7 1.0 -1.3 -2.3 -1.0 -1.4 -1.3 -1.0 0.1 -0.2 51441 51441 1 0.3 -0.3 -0.2 0.07 -0.2 -0.2 -0.3 -0.3 0.3 0.7 0.3 0.5 -0.04 -0.1 -0.3 0.01 0.5 1.3 1.3 1.1 1.5 0.5 0.5 0.8 -0.3 0.04 0.01 -0.2 0.08 1.2 0.1 0.5 -0.1 0.4 0.6 0.1 -1.3 0.3 -0.2 -1.2 -1.2 -1.2 -0.9 0.1 4308 TRPM1 - 1 1.0 1.0 0.2 -0.02 -0.02 -0.02 -0.02 -0.02 -0.09 -0.4 -0.04 -0.3 -0.1 1.3 -1.8 -0.1 0.1 -0.8 -0.7 0.2 -0.09 0.01 0.03 -0.2 0.9 1.4 2.1 2.0 1.3 1.0 0.5 0.4 0.2 0.6 -0.1 0.6 0.9 0.2 -0.04 0.1 -0.3 -0.7 0.01 0.03 0.2 -1.5 0.1 -0.7 -1.7 -1.0 -0.8 -1.9 -1.8 54069 C21orf45 - 1 0.8 0.05 0.0070 -0.2 -0.06 -0.8 -0.2 1.7 0.8 -0.1 -0.4 -0.6 -0.09 0.6 0.3 -0.0020 0.2 0.8 1.3 1.0 1.3 0.4 0.3 1.6 0.8 -0.02 0.2 -0.4 0.6 0.3 0.5 0.06 -0.1 0.2 0.8 -0.4 1.7 0.8 -0.2 -1.1 -0.9 -1.0 -2.8 -1.2 84300 C6orf125 - 1 0.6 0.1 0.1 -0.4 0.01 0.2 -0.6 -0.5 0.3 0.03 -0.3 0.7 0.6 0.0030 -0.4 0.1 -0.09 1.7 1.5 0.6 2.7 -0.1 1.4 1.1 1.5 -0.03 0.06 0.8 1.2 1.5 0.8 0.5 -0.4 -0.05 -0.1 -1.5 -0.1 -1.4 -2.1 -1.3 -1.1 -0.1 -0.1 2053 EPHX2 - 1 -1.0 -0.1 1.1 1.1 1.8 1.0 1.0 1.0 1.3 1.1 1.4 1.8 1.0 -2.0 2.0 0.7 0.5 1.1 0.8 1.6 1.0 1.6 1.7 1.3 1.9 1.9 0.02 -0.6 0.5 -1.6 2.6 2.6 2.1 -3.6 -2.2 -1.3 -1.3 -0.4 -0.7 -0.8 -1.3 -1.6 -0.2 -2.5 -2.3 -1.8 -1.7 -1.9 -1.6 -1.2 -4.1 -0.09 0.5 -0.03 -0.6 0.2 2.3 3479 IGF1 - 1 -0.3 0.3 -0.1 1.5 1.1 1.1 0.4 -0.6 1.2 0.5 2.1 1.4 2.5 2.6 1.2 2.4 2.9 1.1 2.2 1.7 1.7 1.9 1.9 2.0 1.4 1.6 1.6 -0.7 -0.5 0.1 -1.2 -0.8 3.2 -2.2 -0.6 -1.2 -3.2 -0.7 -0.9 -1.4 -1.7 -1.2 -2.3 -2.0 -2.2 -1.9 -0.2 -0.05 1.7 -0.4 -1.1 -2.4 -1.5 -3.1 -0.3 -0.3 -0.5 -0.9 0.4 -0.1 563 AZGP1 - 1 -0.5 0.06 -0.2 0.9 0.9 1.5 1.2 1.2 1.5 1.3 1.1 0.3 1.1 -2.0 -0.04 4.2 1.9 2.1 2.4 2.6 2.3 2.5 2.2 1.9 1.7 2.1 2.1 -0.4 -0.2 0.1 -0.8 2.6 3.3 2.0 -2.6 -3.5 -4.9 -4.5 -1.8 -1.4 -2.2 -2.3 -4.7 -4.4 -2.2 -2.5 -0.2 0.4 -0.02 -9.0 -4.5 -6.0 -3.0 -0.4 0.2 -0.3 -0.6 0.05 0.05 540 ATP7B - 1 -0.4 -0.3 -0.6 -0.5 -0.5 -0.5 -0.5 -0.3 0.2 0.1 1.0 1.0 -1.2 0.02 0.5 1.1 0.8 1.0 0.7 0.9 1.1 2.2 -0.1 0.8 -0.4 -0.7 0.2 -1.6 2.7 -2.6 -2.4 -0.4 -1.5 -1.7 0.4 -0.5 -1.8 -2.5 -1.9 0.3 0.09 -0.6 -1.5 -3.2 -3.7 -4.2 -2.0 -0.05 0.07 -0.07 -1.1 0.2 0.2 3426 IF - 1 -0.08 -0.06 -0.4 -0.2 -0.2 -0.2 -0.1 -0.2 -0.2 1.0 0.02 -0.9 0.9 0.09 0.7 0.6 0.5 0.02 0.5 1.1 1.2 1.0 0.4 1.4 -0.1 -0.7 0.2 -1.4 2.2 0.01 -1.1 -1.3 -1.1 -0.4 -0.6 -0.4 -1.4 -1.7 -1.2 -0.04 -0.2 -0.2 -2.3 -3.2 -2.2 -1.9 -1.6 -0.3 -0.1 -0.5 -0.9 0.6 0.1 2653 GCSH - 1 -0.09 0.2 0.04 0.04 0.5 -0.03 0.2 0.7 -0.02 0.5 1.0 -0.2 0.1 -0.2 1.5 1.1 0.1 1.3 0.9 0.9 0.6 0.2 2.0 1.4 0.9 0.6 -0.4 -0.6 0.4 -0.7 2.7 1.6 2.7 -1.9 -2.0 -1.2 -0.8 -2.0 -0.1 -0.5 -1.1 -1.3 -1.9 -1.9 -1.5 -1.0 -1.2 -0.8 -2.8 0.4 0.3 -0.2 -0.3 -0.6 -0.6 1.8 -0.9 3795 KHK - 1 1.6 -0.0010 -1.6 0.0 0.0 0.0 0.0 0.0 0.6 1.4 0.7 0.1 1.7 -0.5 -1.6 -0.6 -0.6 0.3 1.0 1.0 0.5 1.7 0.8 1.4 0.7 1.6 0.8 -0.08 -0.5 0.06 -1.0 3.7 4.3 0.9 -1.6 -4.7 -0.6 -2.7 -3.0 -1.9 -1.6 -0.9 -1.2 -1.2 -1.9 -0.6 0.3 0.1 -2.1 -0.8 -3.7 -2.0 0.6 1.4 -0.2 0.1 -0.4 -0.8 -0.3 2.3 92591 ASB16 - 1 0.4 0.4 0.1 0.4 0.2 -0.4 0.2 -1.2 -1.0 -1.0 0.2 -0.5 0.7 -0.7 4842 NOS1 - 1 0.5 0.2 -0.4 2.3 -3.4 -3.4 -0.1 -0.1 0.3 0.1 -3.4 1.2 1.7 -3.4 1.1 -0.4 -0.09 -0.8 -0.6 -1.0 0.1 -0.2 -0.08 -0.6 219 ALDH1B1 - 1 -0.09 -0.09 0.0 0.0 0.0 0.0 0.0 1.8 1.7 -0.7 -0.3 1.2 3.0 1.4 1.4 1.4 1.2 1.0 0.9 2.0 1.4 2.0 1.4 -0.3 -0.3 -0.05 -0.6 1.5 -2.8 -3.0 -3.5 1.5 -1.5 -0.5 -1.8 -1.4 -1.5 -1.6 -0.9 -1.0 -1.4 -1.9 0.1 0.2 -0.2 -0.3 -0.6 0.3 0.3