GENE NAME GWEIGHT Whitfield02_14h_Thy_Noc_Exp4 Whitfield02_16h_Thy_Noc_Exp4 Iyer99_Unsynchronized_cyc Lessnick02_Run 1, Day 1 Whitfield02_6_hr_Hela_Double_Thymidine_exp3 Whitfield02_7_hr_Hela_Double_Thymidine_exp3 Whitfield02_8_hr_Hela_Double_Thymidine_exp3 Armstrong01_ALL_1 Armstrong01_ALL_24 Armstrong01_ALL_18 Armstrong01_ALL_6 Armstrong01_ALL_21 Armstrong01_MLL__7 Armstrong01_ALL_12 Alizadeh00_DLCL_0042 Chen02_HCC_HBV_SF15 Chen02_HCC_Fibrolamellar_SF13 Lessnick02_Run1, Day 0 Whitfield02_4h_Thy_Noc_Exp4 Nutt03_Brain_CG_2 Singh02_T37__tumor Nutt03_Brain_NG_8 Sorlie01_BC118B_BE Singh02_T59__tumor Sorlie01_BC38 Singh02_T30__tumor Singh02_T62__tumor Singh02_T41__tumor Singh02_N59__normal Singh02_T57__tumor Singh02_T04__tumor Singh02_T10__tumor Singh02_T31__tumor Singh02_T53__tumor Ramaswamy01_Normal__Germinal_Center_GC3 Alizadeh00_DLCL_0036_OCT_lc5b087 Armstrong01_ALL_19 Alizadeh00_Tonsil_GC_B_lc8n084 Shipp02_DLBC52 Sorlie01_BC6 Golub99_ALL 23368 TA- Norel Perou99_HMEC_X_Matrigel Bhattacharjee01_SQ-SQ6t1-A360-6 Bhattacharjee01_SMCL-5937-A307-5 Bhattacharjee01_AD-186T1-A27-1 Bhattacharjee01_AD-368t2-A285-10 Bhattacharjee01_AD-177T1-A21-1 Perou00_BC711A_AF Bhattacharjee01_AD-341t1a-A123-3 * Bhattacharjee01_AD-379t1-A116-3 * Bhattacharjee01_AD-213t1-A146-4 Bhattacharjee01_AD-169t2-A211-8 * Garber01_184_96_node Bhattacharjee01_AD-252t1-A167-4 Whitfield02_12h_mitotic_selection Bhattacharjee01_COID-3580-A302-5 Bhattacharjee01_AD-253t1-A168-4 Bhattacharjee01_AD-275t1-A95-3 Bhattacharjee01_AD-159t1-A229-8 Bhattacharjee01_AD-207t1-A142-4 Alizadeh00_DLCL_0027 Bhattacharjee01_AD-221t1-A148-4 Bhattacharjee01_AD-266t1-A90-3 Bhattacharjee01_AD-285t2c-A263-10 Bhattacharjee01_AD-350t1a-A126-3 * Perou00_BC213A_AF Bhattacharjee01_AD-131T1-A15-A200-1* Bhattacharjee01_AD-234t1 dup -A155-4 Ross00_UO_31_CL9004_RENAL Bhattacharjee01_AD-230t1-A153-4 Bhattacharjee01_SQ-4389-A327-5 Bhattacharjee01_AD-157T1-A246-10 * Bhattacharjee01_AD-218t1-A147-4 Bhattacharjee01_AD-122t3-A197-8 Bhattacharjee01_AD-043T2-A7-1 Bhattacharjee01_AD-203t1-A140-4 * Bhattacharjee01_AD-309t1-A242-8 Bhattacharjee01_AD-287t1-A101-3 Bhattacharjee01_AD-320t1-A272-10 Bhattacharjee01_AD-383t1-A118-3 * Bhattacharjee01_NL-268n1-A92-3 Bhattacharjee01_AD-305t1-A415-7 Bhattacharjee01_AD-AD3T1-A385-7 Bhattacharjee01_AD-212t1-A145-4 Bhattacharjee01_COID-COID10t1-A347-6 Bhattacharjee01_COID-COID6t1-A343-6 Perou99_HMEC_X_BC24 Perou99_HMEC_X_BC4_0088_5k Alizadeh00_Lymph_Node_lc4b007 Armstrong01_MLL__4 Armstrong01_AML_10 Perou99_HMEC_X_BC21 Armstrong01_MLL_16 Armstrong01_AML_11 Armstrong01_AML_3 Bhattacharjee01_AD-363t1-A283-10 Bhattacharjee01_NL-1675-A409-7 Bhattacharjee01_AD-260t1a-A172-4 * Bhattacharjee01_AD-AD31-A289-10 Bhattacharjee01_NL-1884-A411-7 Bhattacharjee01_AD-327t1-A276-10 * Bhattacharjee01_NL-7530-A338-6 Bhattacharjee01_NL-6084-A335-6 Bhattacharjee01_NL-2562-A413-7 Bhattacharjee01_NL-4083-A333-6 Bhattacharjee01_NL-279n1-A98-3 Whitfield02_0h_Thy_Noc_Exp4 Whitfield02_2h_Thy_Noc_Exp4 Bhattacharjee01_AD-347t1a-A125-3 * Singh02_T39__tumor Garber01_198_96_Adeno Chen02_Liver_HBV_HK28 Whitfield02_4h_mitotic_selection Whitfield02_0h_mitotic_selection_test Whitfield02_0h_mitotic_selection Golub99_ALL_9692_B-cell Rosenwald01_CLL_48 Alizadeh00_Blood_B_cells_anti_IgM_CD40L_6h Sorlie01_BC406A_BE Rosenwald01_CLL_39 Sorlie01_BC37_FA Whitfield02_8h_Thy_Noc_Exp4 Rosenwald01_CLL_24 8340 HIST1H2BL - 1 0.6 0.2 0.6 -0.4 -0.3 -0.5 1.6 2.0 1.6 1.6 1.0 1.2 1.4 -0.4 0.06 1.4 1.3 0.6 2.7 1.0 1.1 1.2 1.3 1.6 1.5 1.5 1.6 1.5 1.6 0.6 1.9 3.0 2.4 2.5 1.9 1.6 2.2 2.2 1.0 1.2 1.0 1.8 1.8 1.0 1.4 -0.9 -1.2 -1.0 -0.5 -1.0 -1.1 -1.1 -1.4 -1.4 -1.2 -2.2 -2.2 -1.1 -1.9 -2.2 -2.2 -1.0 -1.7 -2.2 -2.2 -2.2 -1.2 -2.2 -1.5 -0.6 -4.3 -5.2 -5.6 -2.2 -2.2 -2.2 -2.2 -2.2 -2.2 -2.2 -2.2 -2.2 -2.2 -2.2 -1.1 -0.5 -0.02 -0.7 -0.9 -1.6 -1.9 0.4 3006 HIST1H1C - 1 1.3 0.9 0.9 1.2 0.06 -0.09 -0.02 2.8 1.5 1.0 1.1 1.0 0.6 1.1 1.8 1.6 1.8 -0.05 -0.8 0.1 0.6 -0.07 0.3 1.0 1.7 1.1 1.5 1.0 0.8 1.4 2.0 1.7 2.4 1.3 2.7 2.0 -0.3 3.3 -1.3 0.4 1.3 2.4 3.0 2.7 1.9 2.0 2.8 2.0 2.9 0.1 1.1 1.4 0.8 0.9 0.2 0.1 -1.0 -0.5 0.04 0.6 -0.4 -0.5 -1.0 -1.2 -1.3 -1.1 -1.3 -0.6 -1.3 -1.3 -1.3 -1.3 -0.5 -1.3 -1.1 -0.9 -1.3 -1.3 -1.3 -1.3 -1.3 -1.3 0.8 -2.7 -1.9 -4.3 -4.5 -3.1 -1.3 -1.3 -1.3 -1.3 -1.3 -1.3 -1.3 -1.3 -1.3 -1.3 -1.3 -1.7 -1.2 0.3 -0.8 -1.1 -1.0 -0.5 -0.4 -0.4 -1.5 -1.1 -1.5 -1.0 -1.8 0.1 -1.0 3148 HMGB2 - 1 0.7 0.4 0.9 1.0 0.4 0.3 0.2 0.4 -0.05 0.7 0.4 -0.2 -0.5 -0.2 1.1 1.2 1.1 0.3 0.04 0.8 1.0 -0.6 -1.1 0.04 -0.2 -1.0 0.3 -0.4 -0.3 -1.0 0.6 0.5 0.5 0.04 2.0 1.9 0.9 1.4 1.8 1.2 1.7 1.6 2.0 1.5 -0.8 -0.5 0.5 -0.7 -0.2 -0.7 -0.1 -0.1 0.4 -0.3 -2.2 -0.8 1.3 0.09 -1.1 -0.2 -0.5 -0.5 0.3 0.08 -0.8 1.0 -1.7 0.5 0.3 0.5 0.1 -0.02 -0.9 0.1 -0.8 -1.3 1.1 0.2 0.5 0.3 0.08 0.3 0.4 -1.4 -2.1 -2.5 -1.7 -2.0 0.4 -0.04 -0.3 -1.5 -2.9 -1.2 -1.3 -1.0 -0.7 -0.9 -1.0 -1.3 -1.1 -0.6 0.07 0.04 0.2 -0.02 0.07 -1.2 -1.1 0.2 0.7 -1.0 -1.6 -2.6 -0.1 -2.0 -1.0 -0.4 -2.1 1058 CENPA - 1 1.0 1.2 1.2 1.2 1.2 1.2 0.5 -1.5 1.1 0.7 -0.09 -1.0 -1.8 0.08 0.2 0.3 -0.7 -0.6 -0.7 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 2.8 -0.4 1.0 0.6 1.9 1.2 2.0 1.1 2.4 -1.5 0.5 -0.1 0.1 -0.6 -0.3 -0.09 -0.1 -0.8 -0.1 -0.4 0.04 -1.3 1.1 0.6 -0.2 0.7 0.6 1.2 0.5 1.3 0.1 -0.3 0.6 -0.4 -0.4 0.3 -0.3 0.3 0.6 0.02 -1.0 -1.5 -1.1 -0.6 -0.7 -1.5 -2.6 -2.7 -1.1 0.9 1.5 -1.0 -1.5 -1.5 -1.5 -1.5 -1.5 -1.5 -1.5 -1.5 -1.5 -1.5 -1.3 1.1 0.8 0.6 -0.6 -1.0 0.8 0.6 -2.8 -2.5 -2.9 -1.5 -1.6 -1.1 1062 CENPE - 1 1.1 1.4 1.2 1.3 1.0 1.3 1.2 -0.7 -0.3 0.2 1.0 -3.8 -3.8 -3.8 0.09 1.8 1.1 0.5 1.0 -0.05 -0.03 -0.05 -0.8 -0.03 -1.4 -0.03 -0.03 -0.03 -0.03 -0.03 -0.03 -0.03 -0.03 -0.03 1.7 1.1 2.2 1.1 1.8 1.2 1.4 -0.3 -0.3 0.3 -0.3 -0.3 -0.2 -0.3 -0.3 -0.3 -0.3 0.2 -0.3 -1.4 -0.3 -0.3 -0.3 -0.3 -0.3 0.9 0.6 0.1 0.8 0.8 0.7 0.2 -0.3 0.1 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.8 -3.8 -3.8 1.2 -3.8 -2.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 1.2 1.2 0.7 -0.03 -0.04 -2.3 -1.6 -0.5 -0.9 -1.1 -1.3 -1.3 -0.8 -1.9 -1.9 -1.2 -1.2 8337 HIST2H2AA - 1 0.3 0.2 0.7 -0.2 -0.2 -0.3 0.7 1.1 0.5 0.6 0.7 0.8 0.4 0.8 -0.1 1.6 1.6 1.9 2.5 0.9 1.0 1.0 1.2 1.6 1.9 1.2 1.3 1.3 0.1 0.2 -0.2 -0.1 -0.6 1.3 1.1 1.4 1.9 2.0 1.2 1.5 2.0 1.9 1.6 1.2 1.6 0.4 0.1 1.0 1.0 -1.4 -1.1 -1.0 -1.1 -0.7 -0.9 -1.7 -1.0 -0.9 0.2 -0.7 0.03 -1.9 -2.3 -1.4 -1.8 -1.3 -1.0 -1.0 -1.0 -1.6 -1.3 0.1 1.3 0.5 -0.8 0.4 0.4 -1.4 -3.9 -2.3 -1.7 -2.9 -1.4 -1.9 -2.1 -0.5 -1.6 -1.6 -1.6 -2.4 -1.0 -1.5 -1.0 -1.0 -3.3 -1.0 -1.2 -1.4 -2.0 -0.02 8349 HIST2H2BE - 1 0.3 0.1 0.4 -0.2 -0.6 -0.6 -0.4 1.1 0.1 0.3 0.7 1.1 1.2 1.1 0.7 1.1 1.0 1.1 1.2 1.2 1.5 1.1 1.9 1.4 0.5 1.0 0.8 1.3 0.8 0.1 -0.5 0.6 -0.2 0.9 0.1 0.9 0.9 1.0 0.8 2.1 2.6 0.4 0.8 1.4 0.4 2.6 1.4 0.1 3.2 -0.2 -1.1 1.0 0.1 -1.2 -1.5 -1.4 -1.2 -0.4 -1.0 -0.9 -1.5 -1.5 -1.0 -1.3 -0.1 -1.0 -0.4 -1.0 -1.9 -2.3 -1.6 -2.0 -2.3 -1.4 -2.1 -2.0 0.5 2.3 -1.4 1.1 -0.9 -2.7 -2.5 -3.6 -3.3 -2.2 -2.7 -2.5 -1.0 -1.5 -1.0 -1.2 -1.5 -1.3 -0.7 -0.4 -1.0 -1.9 -1.1 -1.1 -0.2 -0.6 -0.7 -1.5 -1.2 0.4 85236 HIST1H2BK - 1 1.2 0.9 1.3 1.3 0.2 1.5 0.4 0.8 1.5 1.1 1.2 1.8 0.4 1.7 -5.0E-4 0.2 -0.1 0.6 0.1 -0.3 -0.4 0.7 1.3 1.1 0.7 0.7 0.2 1.6 0.05 -0.01 1.5 1.5 2.1 2.0 1.8 0.6 1.2 1.6 1.5 2.1 0.6 0.6 -0.4 1.8 1.3 0.7 1.0 -1.2 -1.1 -1.5 -0.6 -1.2 -0.1 -0.5 -1.3 -0.5 -0.4 -1.9 0.09 -1.1 -1.4 -0.3 -0.03 -2.1 -2.9 -1.9 -2.8 -2.2 -1.4 -1.1 -2.1 -1.5 -0.6 -0.09 -0.2 -1.8 -1.0 -0.7 -1.9 -1.8 -1.5 -1.2 -1.4 -1.3 -1.6 -2.1 -1.0 -0.4 -0.4 -0.5 -0.4 -1.1 -1.1 -1.2 -1.4 -1.2 -0.6 -0.8 -1.0 -0.4 0.4 -1.1 0.3 3012 HIST1H2AE - 1 -0.1 -0.1 -0.1 0.0050 0.03 0.05 1.8 3.2 2.0 1.1 2.2 2.2 0.8 0.6 1.0 -0.4 1.1 0.2 -0.02 1.9 -0.02 0.3 -0.1 0.0060 1.3 -0.9 2.7 2.4 2.1 2.2 1.1 -0.06 -1.5 -0.8 1.9 -0.6 5.0 2.4 2.8 1.2 0.8 -0.6 -0.2 -0.06 -0.6 0.1 -0.6 -0.6 -0.6 1.4 -0.6 -1.0 -0.6 -0.6 -0.5 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -1.1 -3.8 -7.7 -7.7 -7.7 -7.7 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.2 0.1 -0.6 -1.0 -0.7 0.4 0.2 0.05 0.03 -0.6 -0.9 -0.5 -0.07 -0.0030 22982 22982 1 -0.01 0.07 0.1 -0.01 -0.09 0.7 0.08 0.02 1.5 1.9 1.4 0.5 0.03 0.1 -1.0 0.1 -0.1 -0.6 0.3 0.3 0.2 -0.2 -1.5 -1.1 0.1 64215 DNAJC1 - 1 0.1 0.2 0.2 -0.05 0.08 0.08 0.9 0.9 0.5 1.8 1.3 -0.4 -0.7 0.2 -0.3 -1.1 -1.1 -0.4 0.5 -0.3 -0.1 -0.5 -0.4 -0.3 -0.9 -0.7 0.4 85028 85028 1 0.6 0.6 0.2 0.2 0.3 -0.3 0.1 -0.3 1.1 0.7 -1.3 -1.3 -1.3 -0.9 0.01 -0.6 0.04 -0.2 -0.4 -0.1 -0.2 0.4 8970 HIST1H2BJ - 1 0.3 0.2 0.3 -0.1 0.1 0.1 -0.0070 2.0 0.2 2.6 1.0 1.3 1.7 1.0 -0.4 0.2 1.6 0.3 0.1 0.1 -0.0030 0.1 0.5 0.08 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 -0.06 -0.4 1.1 -0.2 2.0 1.9 1.3 0.9 2.3 0.2 -0.04 2.1 -1.0 -1.1 -0.2 1.5 -0.3 -1.1 1.7 -1.1 0.2 -1.1 -0.8 0.05 -0.6 -0.2 -0.2 -1.1 -1.1 -0.5 -0.1 -1.1 -1.1 -1.1 -1.1 -1.1 -1.1 -0.8 -1.1 -0.8 -1.1 -1.1 -1.1 -1.1 -1.1 0.01 -1.1 -3.1 -7.7 -3.3 -3.8 -7.7 -1.1 -1.1 -1.1 -1.1 -1.1 -1.1 -1.1 -1.1 -1.1 -1.1 -1.1 -0.3 0.4 1.3 0.1 0.1 -0.3 -0.5 -0.1 -0.4 0.7 0.5 0.3 64755 64755 1 -0.4 -0.3 0.2 0.1 0.4 -0.1 -0.01 0.02 0.8 0.2 -0.7 -0.8 -1.0 -0.1 -0.5 0.6 0.7 0.5 -0.4 80824 DUSP16 - 1 -0.1 -0.1 0.1 0.04 0.0010 -0.02 -0.4 -0.4 0.2 1.1 -0.3 1.1 1.0 -0.6 -0.1 -0.07 -0.1 0.08 0.1 0.6 0.2 -0.3 0.2 -0.3 0.7 0.1 -0.2 6397 SEC14L1 - 1 -0.1 -0.04 0.1 -0.1 -0.1 -0.08 -6.6 -6.6 -2.0 -1.6 -0.9 -0.8 -0.5 -0.07 0.3 -0.5 -0.2 -0.03 1.5 0.8 -0.2 -0.6 -0.2 -0.05 -0.2 1.0 -0.2 0.04 0.7 -0.2 -0.2 -0.2 -0.2 1.3 1.4 1.5 1.6 2.8 0.7 0.9 0.6 0.6 1.8 -1.3 -1.4 -1.0 -0.6 -1.9 -1.4 -2.6 -1.9 0.01 0.5 0.7 1.1 -0.6 0.1 -1.9 -1.5 -1.6 -2.1 -1.0 0.0030 0.5 0.2 -0.05 -0.5 -0.6 -1.6 -1.5 -1.9 -0.8 -2.0 -1.3 -1.6 -2.3 -2.1 -3.0 0.1 0.8 -1.0 -0.9 2.0 1.9 -1.2 -1.2 -0.3 -0.9 -2.4 -1.9 -1.3 -6.6 -0.5 0.5 0.4 -0.5 -2.0 1.4 -1.3 -1.5 1.3 1.2 1.6 1.5 -0.5 0.2 -1.2 -0.2 0.5 1.0 0.2 0.03 0.2 -0.2 -0.07 -0.07 0.1 0.3 0.4 -0.1 0.01 63027 C6orf85 - 1 0.06 0.05 0.09 0.08 0.01 0.1 0.6 -0.03 0.3 3.0 0.8 1.8 3.1 -0.6 -0.0030 -1.9 -0.6 -0.1 0.3 0.6 0.2 -0.07 -0.06 -0.0050 0.04 -0.4 0.04 6338 SCNN1B - 1 0.0070 -0.2 0.0 0.2 0.2 -0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 -0.0050 0.0 -0.0050 -0.0050 -0.0050 -0.0050 -0.0050 -0.0050 -0.0050 -0.0050 -0.0050 -0.0050 -0.9 0.0 1.1 1.2 1.2 -2.0 -2.0 -2.0 -2.0 -2.0 -2.0 -2.0 0.03 -2.0 -1.7 0.09 -2.0 -2.0 -2.0 1.9 3.0 -2.0 -2.0 -2.0 -2.0 -2.0 -2.0 -2.0 -2.0 -1.6 -2.0 -2.0 -2.0 1.9 -0.7 -2.0 -2.0 -0.1 -2.0 -2.0 -0.6 -2.0 -2.0 -2.0 -0.7 -1.0 0.0 0.0 -1.0 0.0 0.0 0.0 -1.4 -2.0 -2.0 -2.0 -2.0 1.5 0.1 -0.4 0.4 0.1 -0.3 -0.1 -0.0020 1.7 -0.0050 -0.08 -0.4 0.03 -4.0 -0.08