GENE NAME GWEIGHT Chen02_Liver_HBV_SF1 Whitfield02_7_hr_Hela_Double_Thymidine_exp2 Whitfield02_8_hr_Hela_Double_Thymidine_exp2 Chen02_Liver_HBV_HK10_S2 Chen02_Liver_HCV_SF30 Sorlie01_BC35_0 Whitfield02_32_hr_Hela_Double_Thymidine_exp2 Detweiler01_E3_U937_phoP_0_5ha Blader01_HFF_infected_with_PDS_tacyzoites_24_hour Blader01_HFF_infected_with_PDS_tachyzoites_14_hours_duplicate_1 Whitfield02_19_hr_Hela_Double_Thymidine_exp3 Cuadras02_Control_1_mocka16h_vs_mockb_16h Cuadras02_Infection_1_RRVa_16h_vs_mocka16h Blader01_HFF_infected_with_PDS_tachyzoites_1_hour Blader01_HFF_infected_with_PDS_tachyzoites_6_hour Perou00_BC213A_AF Detweiler01_E2_U937_wild_type_1hb Alizadeh00_CLL_52_lc7b069 Sorlie01_BC402B_BE Detweiler01_E2_U937_wild_type_1ha Detweiler01_E2_U937_wild_type_2h Detweiler01_E2_U937_wild_type_30m Sorlie01_BC_HBC4_T1 Detweiler01_E1_U937_wild_type_4h Detweiler01_E1_U937_mock_4h Detweiler01_E1_U937_wild_type_30m Detweiler01_E1_U937_mock_30m Detweiler01_E6_U937_mock_1h Detweiler01_E6_U937_wild_type_1h Detweiler01_E6_U937_phoP_4h Detweiler01_E6_U937_wild_type_3h Detweiler01_E6_U937_mock_3hr Detweiler01_E6_U937_phoP_2h Detweiler01_E6_U937_phoP_3h Detweiler01_E6_U937_wild_type_0_5h Shipp02_DLBC2 Sorlie01_BC_A Alizadeh00_Blood_B_cells_memory_CD27_ Perou00_BC711A_AF Whitfield02_26_hr_Hela_Double_Thymidine_exp2 Whitfield02_40_hr_Hela_Double_Thymidine_exp2 Cuadras02_Tc_1h Sorlie01_BC610A_BE Garber01_6_00_LCLC Garber01_12_00_Adeno Garber01_239_97_SCC Whitfield02_9_hr_Hela_Double_Thymidine_exp2 Ross01_MCF_10A Whitfield02_1_hr_Hela_Double_Thymidine_exp2 Sorlie01_BC20_FA Chen02_Liver_HBV_HK21 Golub99_AML SH 5 Perou00_BC114B_AF Alizadeh00_CLL_39_lc7b070 Perou00_BC110A_AF Whitfield02_15_hr_Hela_Double_Thymidine_exp2 Garber01_166_96_SCC Garber01_42_95_SCC Cuadras02_Tc_24h Cuadras02_Tc_12h Whitfield02_16_hr_Hela_Double_Thymidine_exp2 Whitfield02_44_hr_Hela_Double_Thymidine_exp2 Detweiler01_E2_U937_mock_30m Whitfield02_0_hr_Hela_Double_Thymidine_exp2 Whitfield02_24_hr_Hela_Double_Thymidine_exp2 Whitfield02_5_hr_Hela_Double_Thymidine_exp2 Perou00_BC305B_AF Garber01_319_00MT1_Adeno Garber01_165_96_Adeno Chen02_HCC_HBV_HK29 Chen02_Liver_HBV_HK37 Chen02_Liver_HBV_HK47 Chen02_HCC_HBV_HK48 Whitfield02_20_hr_Hela_Double_Thymidine Whitfield02_30_hr_Hela_Double_Thymidine Whitfield02_2hr_Hela_Double_Thymidine Whitfield02_14_hr_Hela_Double_Thymidine Sorlie01_BC210B_AF Ross01_MDA_MB_231_UTSW Chen02_Hep40_cells Chen02_SNU475_cells Chen02_SNU182_cells Bhattacharjee01_COID-2260-A304-5 Bhattacharjee01_COID-4518-A305-5 Bhattacharjee01_COID-COID5t1-A342-6 Bhattacharjee01_AD-338t1a-A121-3 * Sorlie01_BC309A_BE Chen02_HCC_HBV_SF21 Chen02_Liver_HBV_SF23 Chen02_HCC_HBV_HK9 Chen02_HCC_HBV_SF18 Chen02_HCC_HBV_CH3 Chen02_SNU398_cells Chen02_Hep3B_cells Chen02_HepG2_cells Chen02_SNU449_cells Chen02_Liver_HBV_HK7 Chen02_HCC_HBV_HK5 Chen02_HCC_HBV_HK7 Chen02_HCC_HBV_SF22 Chen02_HCC_HBV_SF23 Chen02_HCC_HCV_SF20 Chen02_Liver_HBV_HK6 Chen02_Liver_HCV_SF28_1 Chen02_Liver_HBV_SF15 Chen02_Liver_HBV_HK9 Chen02_Liver_HCV_SF28_2 Detweiler01_E2_U937_wild_type_4hb Detweiler01_E2_U937_wild_type_3h Detweiler01_E3_U937_mock_1hb Detweiler01_E2_U937_mock_2hb Detweiler01_E2_U937_mock_4hb Chen02_Met_Ovarian_Granulosa_Cell_Tumor_SF39_T1 Chen02_Endometrial_Stromal_Sarcoma_SF26 Chen02_Met_Colon_Cancer_SF38 Chen02_SNU423_cells Chen02_HCC_HBV_HK43 Chen02_HCC_HBV_HK86 Chen02_SNU387_cells Chen02_Liver_HCV_SF3 Chen02_HCC_HCV_SF24 Chen02_HCC_HBV_HK51 Chen02_HCC_HBV_HK85_T1 Chen02_HCC_HBV_HK85_T2 Chen02_HCC_HBV_HK49 Chen02_HCC_HBV_HK47 Chen02_Liver_HBV_HK49 Garber01_3_00_SCC Garber01_245_97_SCC Garber01_315_99_node Sorlie01_BC_HBC2 Chen02_Liver_HBV_HK84 Chen02_Met_Colon_Cancer_SF37 Chen02_HCC_HCV_SF30 Chen02_HCC_HBV_SF1_1 Detweiler01_E2_U937_mock_2h Chen02_HCC_HBV_SF17 Chen02_HCC_HBV_SF12 Chen02_Liver_HBV_HK5 Chen02_HCC_HBV_SF15 Garber01_199_97_Adeno_c Chen02_HCC_HBV_SF27 Garber01_58_95_SCC Garber01_219_97_normal Garber01_306_99_node Chen02_Liver_HBV_HK4 Garber01_69_96_Adeno Garber01_237_97_Adeno Garber01_157_96_SCC Sorlie01_BC808A_BE Perou00_BC808A_AF Garber01_222_97_Adeno Garber01_226_97_Adeno Chen02_Liver_HCV_SF29_S1 Chen02_Liver_HCV_SF29_S2 Sorlie01_BC11_FA Garber01_315_99_normal Garber01_314_99_normal Garber01_222_97_normal Garber01_315_99_SCLC Garber01_245_97_node Garber01_220_97_node Garber01_232_97_node Garber01_220_97_SCC Garber01_314_99_SCLC Detweiler01_E2_U937_mock_3h Chen02_Liver_HBV_HK16 Chen02_HCC_HBV_HK64_T7 Chen02_HCC_HBV_HK62_T1 Chen02_HCC_HK6 Chen02_Liver_HBV_HK64 Perou00_BC107A_AF Garber01_320_00_Adeno_c Garber01_320_00_Adeno_p Chen02_Liver_SF36 Chen02_Liver_SF6 Chen02_Liver_HBV_HK62 Sorlie01_Normal_Breast1 Chen02_HCC_HBV_HK64_T4 Chen02_HCC_HBV_HK64_T5 Chen02_HCC_HBV_HK63_T1 Chen02_HCC_HBV_HK84 Chen02_HCC_HBV_HK63_T2 Chen02_HCC_HBV_HK64_T3 Chen02_HCC_HBV_HK64_T6 Chen02_HCC_HBV_HK67_T1 Chen02_HCC_HBV_HK67_T2 Chen02_HCC_HBV_HK67_T3 Chen02_HCC_HBV_HK62_T2 Chen02_Liver_HBV_HK67 Chen02_HCC_HBV_HK65_T2 Chen02_Adenoma_HK69 Chen02_FNH_HK70 Ross01_HMS32 Chen02_FNH_HK72 Chen02_HCC_HBV_HK64_T2 Chen02_HCC_HBV_HK66_T5 Chen02_HCC_HBV_HK65_T1 Whitfield02_22_hr_Hela_Double_Thymidine_exp2 Whitfield02_20_hr_Hela_Double_Thymidine_exp2 Ross01_MCF_12A Sorlie01_BC110B_BE Perou00_BC710B_AF Whitfield02_18_hr_Hela_Double_Thymidine_exp2 Whitfield02_11_hr_Hela_Double_Thymidine_exp2 Detweiler01_E3_U937_wild_type_1hc Detweiler01_E3_U937_wild_type_0_5hb Detweiler01_E3_U937_phoP_0_5hb Detweiler01_E3_U937_mock_1hc Detweiler01_E3_U937_wild_type_2hb Detweiler01_E3_U937_phoP_4hb Detweiler01_E3_U937_mock_4hb Detweiler01_E3_U937_mock_2hc Perou00_184B5 Chen02_HCC_HK55 Chen02_HCC_HBV_HK58 Perou00_RPMI_8226 Chen02_HCC_HBV_HK56 Chen02_HCC_HBV_HK37 Chen02_HCC_HBV_HK39 Chen02_HCC_HBV_HK38 Chen02_HCC_HBV_HK54 Perou00_MOLT4 Chen02_HCC_HBV_HK53 Chen02_HCC_SF4 Chen02_HCC_HBV_HK57 Chen02_HCC_SF8 Chen02_HCC_HBV_HK18 Chen02_HCC_SF9 Chen02_HCC_HBV_HK19 Chen02_HCC_HBV_HK12 Chen02_HCC_HBV_HK15 Chen02_HCC_HBV_HK22 Chen02_HCC_HBV_SF35_1 Chen02_HCC_HK23 Chen02_HCC_HBV_HK28 Chen02_HCC_HBV_HK24 Chen02_HCC_HBV_HK3 Chen02_HCC_HBV_HK27 Chen02_HCC_HCV_SF3 Chen02_HCC_HBV_HK1 Ramaswamy01_Tumor__Renal_Carcinoma_6775 Perou00_SK_BR_3 Detweiler01_E3_U937_mock_1ha Garber01_185_96_Adeno Chen02_Liver_HBV_HK20 Chen02_Liver_SF5 Chen02_HCC_HBV_HK31 Chen02_HCC_HBV_HK36 Whitfield02_36h_Thy_Noc_Exp4 Perou00_SW872 Chen02_Met_Colon_Cancer_SF10 Chen02_Adenoma_SF25 Ross01_BJ_hTERT_PD210_Fibroblasts_UTSW Garber01_137_96_Adeno Garber01_218_97_Adeno Garber01_187_96_Adeno Chen02_Liver_HBV_HK38 Chen02_Liver_HBV_HK33 Chen02_Liver_HBV_HK39 Chen02_Liver_HBV_HK31 Chen02_Liver_HBV_SF32 Chen02_Liver_HBV_HK26 Chen02_Liver_HBV_HK24 Chen02_Liver_HBV_HK28 Chen02_Liver_HBV_HK27 Sorlie01_BC307B_BE Chen02_Liver_HBV_HK36 Chen02_Liver_HBV_HK1 Chen02_Liver_HBV_HK3 Chen02_Liver_HBV_HK30 Chen02_HCC_HBV_HK33 Chen02_HCC_HBV_SF32 Chen02_FNH_SF33 Chen02_Liver_SF33 Chen02_Liver_HK23 Chen02_Liver_SF9 Chen02_Liver_SF8 Sorlie01_Normal_Breast2 Chen02_Liver_SF16 Chen02_Liver_SF4 Chen02_FNH_SF16 Perou00_BC38_LN38 Boldrick02_Live_vs_Killed_Dataset_Bp338_Killed_timecourse_4hr Garber01_180_96_Adeno Garber01_207_97_SCLC Garber01_80_96_Adeno Garber01_223_97_Adeno Garber01_257_97_Adeno Garber01_204_97_Adeno Garber01_139_97_LCLC Garber01_184_96_node Garber01_230_97_SCLC Garber01_181_96_Adeno Garber01_147_96_Adeno Whitfield02_0_1hr_Hela_Double_Thymidine Whitfield02_0_2hr_Hela_Double_Thymidine Whitfield02_6hr_Hela_Double_Thymidine Alizadeh00_OCI_Ly10 Sorlie01_BC115B_BE Garber01_319_00PT_Adeno Garber01_198_96_Adeno Garber01_156_96_Adeno Garber01_256_97_LCLC Garber01_319_00MT2_Adeno Garber01_199_97_Adeno_p Whitfield02_34h_Thy_Noc_Exp4 Perou00_184A1_LATE Garber01_178_96_Adeno Chen02_HCC_HBV_HK20 Chen02_HCC_HBV_HK65_T4 Chen02_HCC_HBV_HK21 Cuadras02_Tc_6h Detweiler01_E6_U937_phoP_1h Detweiler01_E6_U937_mock_2h Whitfield02_4hr_Hela_Double_Thymidine Whitfield02_8_hr_Hela_Double_Thymidine Whitfield02_12_hr_Hela_Double_Thymidine Whitfield02_10_hr_Hela_Double_Thymidine Detweiler01_E6_U937_mock_4h Whitfield02_16_hr_Hela_Double_Thymidine Whitfield02_6_hr_Hela_Double_Thymidine_exp2 Whitfield02_12_hr_Hela_Double_Thymidine_exp2 Whitfield02_10_hr_Hela_Double_Thymidine_exp2 Whitfield02_14_hr_Hela_Double_Thymidine_exp2 Cuadras02_Tc_control Chen02_Liver_HBV_HK46 Chen02_HCC_HK46 Garber01_68_96_Adeno Whitfield02_28_hr_Hela_Double_Thymidine_exp2 Whitfield02_36_hr_Hela_Double_Thymidine_exp2 Whitfield02_3_hr_Hela_Double_Thymidine_exp2 Whitfield02_4_hr_Hela_Double_Thymidine_exp2 Whitfield02_2_hr_Hela_Double_Thymidine_exp2 Chen02_HCC_Fibrolamellar_SF13 Chen02_HCC_HBV_HK8 Chen02_HCC_HBV_HK11 Chen02_HCC_HBV_HK13 Chen02_Met_Colon_Cancer_SF5 Chen02_HCC_HBV_HK4 Chen02_HCC_HBV_HK14 Chen02_HCC_HBV_SF7 Chen02_Liver_HBV_HK89 Sorlie01_BC24 Detweiler01_E3_U937_wild_type_0_5h Detweiler01_E3_U937_mock_2hb Sorlie01_BC38 Garber01_246_97_SCC_p Detweiler01_E3_U937_phoP_2hc Garber01_246_97_SCC_c Detweiler01_E3_U937_mock_0_5h Garber01_299_99_Adeno Garber01_161_96_Adeno Garber01_75_95_combined Garber01_313_99PT_Adeno Garber01_313_99MT_Adeno Chen02_Liver_HBV_HK14 Chen02_Liver_HBV_HK17 Chen02_Liver_HBV_HK10 Chen02_Liver_HBV_HK22 Chen02_HCC_HK2 Chen02_Liver_HBV_HK18 Chen02_Liver_HBV_HK19 Chen02_Liver_HBV_HK15 Chen02_Liver_HK2 Chen02_Liver_SF19 Chen02_HCC_HBV_HK16 Chen02_Liver_HBV_HK12 Chen02_Liver_HBV_HK11 Chen02_Liver_HBV_HK13 Cuadras02_Infection_4_RRVa_1h_vs_mocka_1h Cuadras02_Infection_6_RRVb_1h_vs_mocka_1h Chen02_HCC_HBV_HK66_T4 Chen02_HCC_HBV_HK66_T3 Chen02_HCC_HBV_HK66_T2 Perou00_BC118A_AF Ramaswamy01_Tumor__Mesothelioma_169_T7 Cuadras02_Control_2_mockc_16h_vs_mocka_16h Cuadras02_Control_4_mocka_1h_vs_mockb_1h Sorlie01_BC214B_BE Singh02_N14__normal Singh02_N47__normal Cuadras02_Control_5_mockc_1h_vs_mocka_1h Lessnick02_Run 2, Day 2 Lessnick02_Run 1, Day 2 Whitfield02_22h_Thy_Noc_Exp4 Sorlie01_BC790 Whitfield02_26h_Thy_Noc_Exp4 Whitfield02_20h_Thy_Noc_Exp4 Chen02_Liver_HBV_SF34 Chen02_Liver_HBV_HK29 Chen02_Liver_HBV_HK63 Chen02_Liver_SF10 Chen02_Liver_HBV_SF35 Chen02_Liver_HK41 Chen02_HCC_HBV_HK50 Chen02_HCC_HBV_SF34_2 Chen02_HCC_HBV_SF34_1 Ramaswamy01_Tumor__Leukemia_ALL-T_ALL_ 92_571 _BM Sorlie01_BC120A_BE Blader01_HFF_were_treated_with_1_45x107_toxo_in_a_transwell_plate Sorlie01_BC46_LN46 Armstrong01_ALL_22 Garber01_132_95_Adeno Chen02_Liver_SF11 Sorlie01_BC713A_BE Chen02_Liver_HBV_HK85 Sorlie01_BC406A_2ndTUMOR Chen02_HCC_HBV_CH2 Garber01_265_98_Adeno Sorlie01_BC503B_BE Sorlie01_BC201B_BE Chen02_SK_HEP_1_cells Garber01_234_97_Adeno Chen02_Met_Colon_Carcinoid_SF11 Sorlie01_BC_HBC3 Garber01_11_00_Adeno Ross01_HCC_1937 Perou00_HUVEC Ramaswamy01_Normal__Kidney_Norm_627 Cuadras02_Infection_3_RRVb_16h_vs_mocka_16h Cuadras02_Infection_2_RRVb_16h_vs_mockb_16h Blader01_HFF_were_treated_with_PDS_tachyzoites_for_4_hours_to_be_used_with_hd092_093_transwellxpts_ Garber01_248_97_LCLC Garber01_306_99_normal Garber01_fetal_lung Garber01_232_97_SCC Garber01_191_96_Adeno Garber01_219_97_SCC Chen02_HCC_HBV_SF34_3 Chen02_HCC_HBV_SF35_2 Chen02_HCC_HBV_SF35_3 Chen02_Adenoma_HK73 Chen02_Liver_HBV_SF22 Chen02_Liver_HBV_SF21 Sorlie01_BC40 Ross00_HOP_92_CL1029_NSCLC Ramaswamy01_Normal__Prostate_PR_4 Ramaswamy01_Normal__Prostate_PR_3 Ross01_HB2 Ramaswamy01_Normal__Breast_BR_1 Ramaswamy01_Normal__Uterus_UT_3 Ramaswamy01_Normal__Prostate_PR_6 Ramaswamy01_Normal__Prostate_PR_7 Ramaswamy01_Tumor__Prostate_Adeno_P_0025 Ramaswamy01_Tumor__Prostate_Adeno_P_0030 Ross01_HME31 Ross01_MCF7_UCLA Ramaswamy01_Normal__Colon_CR_4 Sorlie01_Normal_Breast3 Ramaswamy01_Normal__Breast_BR_3 Sorlie01_BC37_FA Cuadras02_Infection_5_RRVb_1h_vs_mockb_1h Perou00_184Aa Ramaswamy01_Normal__Breast_BR_2 Cuadras02_Control_3_RRVa_16h_vs_RRVb_16h Ramaswamy01_Normal__Bladder_BL_5 Sorlie01_BC107B_BE 1762 DMWD - 1 0.1 -0.2 0.7 -1.5 -1.3 -4.1 -0.3 0.5 -0.05 -0.08 0.06 -0.03 -0.09 -0.04 -0.6 -0.3 -0.1 -2.4 0.7 -1.9 0.2 -1.3 -1.0 3.1 2.0 0.7 2.4 2.4 4.5 1.0 1.4 -8.0E-4 -0.1 -2.7 2.0 0.8 1.8 0.7 1.6 -0.2 1.7 -0.06 -0.4 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