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 >4x |
Module 270 |
| General Properties | |
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| Below we list the number of gene sets from which the module was composed was originally composed, and the number of genes and experiments that it contains. Clicking on the number of genes will display a detailed list of all the genes in the module. Clicking on the number of experiments will display a detailed list of all the experiments in the module. | |
| Num gene sets: | 2 |
| Num genes: | 22 (see 12 additional genes for this module) |
| Num experiments: | 29 (15 induced, 14 repressed) |
| Gene sets | |
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| Below we list the gene sets from which the module was originally composed. Clicking on a gene set will display all the genes associated with that gene set. Also listed are all the other modules in which the gene set participates. | |
| Monoamine GPCRs | 270 372 441 |
| Iyer99 44 | 270 372 441 |
| Enriched clinical annotations | ||||
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| For each of the clinical annotations, we tested whether it was enriched in the set of experiments in which the module is significantly induced (or repressed). Below we list all such annotations that were enriched in this module with an FDR corrected p-value of 0.05 ('P-value' column), along with the number ('Hits' column) of induced (or repressed) experiments in which they appear. We also show the fraction of experiments with the given annotation that are included in this module ('Hits (%)' column). Rows that correspond to annotations that were enriched in the induced experiments of the module have a red background, while rows corresponding to annotations enriched in the repressed experiments have a green background. For each annotation, we also list the other modules in which it was enriched. | ||||
| Clinical annotation | P-value | Hits | Hits(%) | Modules |
| COID | 1.01e-05 | 4 | 26.666 | 1 3 5 6 7 8 10 11 15 17 18 22 25 27 34 36 38 41 42 44 47 52 54 58 62 66 67 68 74 76 77 79 84 92 94 100 104 105 107 108 109 113 116 118 119 121 122 126 128 129 130 131 137 139 143 144 148 152 153 154 164 165 169 170 171 172 174 177 180 181 191 194 204 208 209 213 215 223 230 234 235 241 250 254 262 263 270 275 291 292 293 297 298 307 311 312 316 321 324 326 327 342 345 348 357 373 379 381 382 385 390 391 401 406 412 413 426 431 435 436 439 443 450 461 462 464 467 473 479 483 488 513 514 526 538 540 543 549 564 573 578 |
| AML | 2.01e-05 | 5 | 35.714 | 11 27 33 36 46 63 64 66 72 75 85 94 99 100 105 117 119 120 129 137 138 174 175 178 181 188 199 204 238 242 244 248 270 301 302 331 340 344 361 362 379 444 466 481 500 503 539 544 576 |
| Enriched GO annotations | ||||
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| For each GO annotation, we tested whether it was enriched in the set of genes of the module. Below we list all such annotations that were enriched in this module with an FDR corrected p-value of 0.05 ('P-value' column), along with the number ('Hits' column) of genes in which they appear. We also show the fraction of genes with the given GO annotation that are included in this module ('Hits (%)' column). |
| Visual display | |||||||||
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| Below is a visual display of the module. Shown are those arrays in which the module's genes significantly change, and the direction of change (induction/repression) in each array is indicated (middle, labeled 'Module changes'; red/green row). The arrays that correspond to the significant clinical attributes are also shown (top; brown rows). The gene sets that compose the module are also shown (left) along with an indication of the membership of the module genes in these gene sets. | |||||||||
| You can also view the images within GeneXPress by loading the module gxp file file. | |||||||||
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