Manfred Claassen

Absolute protein abundance estimation using label-free SRM

README

Function library for model selection with monte carlo cross validation
lf_srm_quant.R

Example script for model selection with monte carlo cross validation
lf_srm_quant_example.R

Test input
test_abundances.csv
test_mrmprophet_output.csv

Reference
Ludwig C, Claassen M, Schmidt A, Aebersold R, "Estimation of Absolute Protein Quantities of Unlabeled Samples by Selected Reaction Monitoring Mass Spectrometry", Molecular Cellular Proteomics, 2011