Induced experiments for module 458

Experiment nameClinical attributes
Blader01_HFF_infected_with_HFF_cell_debris_24_hoursFibroblasts (Fibroblast infection*), Skin fibroblasts (Fibroblast infection*)
Blader01_HFF_infected_with_PDS_tachyzoites_14_hours_duplicate_2Fibroblasts (Fibroblast infection*), Skin fibroblasts (Fibroblast infection*), Toxoplasma infected skin fibroblasts (Fibroblast infection*)
Blader01_HFF_infected_with_PDS_tachyzoites_24_hourFibroblasts (Fibroblast infection*), Skin fibroblasts (Fibroblast infection*), Toxoplasma infected skin fibroblasts (Fibroblast infection*)
Blader01_HFF_infected_with_PDS_tachyzoites_6_hourFibroblasts (Fibroblast infection*), Skin fibroblasts (Fibroblast infection*), Toxoplasma infected skin fibroblasts (Fibroblast infection*)
Blader01_HFF_infected_with_PDS_tacyzoites_24_hourFibroblasts (Fibroblast infection*), Skin fibroblasts (Fibroblast infection*), Toxoplasma infected skin fibroblasts (Fibroblast infection*)
Boldrick02_Diversity_Dataset_Bp338_timecourse_2_0_hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), B. petrussis 338 stimulated immune cells (Stimulated PBMC), Lymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*)
Boldrick02_Dose_Response_Dataset_Bp_LPS_0_01ug_ml_timecourse_0_5hrLymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), 0.5hr immune stimulation (Stimulated PBMC), Lipopolysaccharide (LPS) stimulated immune cells (Stimulated PBMC), 1X dose immune stimulation (Stimulated PBMC)
Boldrick02_U937_Dataset_BpTox6_timecourse_1_hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), Monocytes (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC), B. petrussis Tox 6 stimulated immune cells (Stimulated PBMC)
Chen02_FNH_HK72Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Focal nodular hyperplasia (FNH) of the liver (Liver cancer)
Chen02_FNH_SF33Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Focal nodular hyperplasia (FNH) of the liver (Liver cancer)
Chen02_HCC_HBV_HK62_T2Hepatocellular carcinoma (Liver cancer), Adenocarcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), p53 positive hepatocellular carcinoma (Liver cancer)
Chen02_HCC_HBV_HK85_T2Hepatocellular carcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*)
Chen02_HCC_HBV_SF21Hepatocellular carcinoma (Liver cancer), Adenocarcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*)
Chen02_HCC_HBV_SF23Hepatocellular carcinoma (Liver cancer), Adenocarcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Invasive liver tumor (Liver cancer)
Chen02_HCC_HBV_SF34_1Hepatocellular carcinoma (Liver cancer), Adenocarcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*)
Chen02_HCC_SF8Hepatocellular carcinoma (Liver cancer), Adenocarcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*)
Chen02_Liver_HBV_HK1Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HBV_HK10Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HBV_HK14Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HBV_HK21Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HBV_HK26Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HBV_HK27Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HBV_HK30Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HBV_HK31Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HBV_HK36Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HBV_HK46Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HBV_HK5Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HBV_HK63Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HBV_HK64Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HBV_HK7Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HBV_SF1Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HBV_SF15Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HBV_SF18Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HBV_SF23Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Chen02_Liver_HCV_SF28_2Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer), Hepatitis C virus (HCV) infected liver (Liver cancer)
Chen02_Liver_HCV_SF29_S1Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer), Hepatitis C virus (HCV) infected liver (Liver cancer)
Chen02_Liver_HCV_SF29_S2Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer), Hepatitis C virus (HCV) infected liver (Liver cancer)
Chen02_Liver_HCV_SF3Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer), Hepatitis C virus (HCV) infected liver (Liver cancer)
Chen02_Liver_HK23Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer), Normal tissue (Liver cancer)
Chen02_Liver_SF8Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer), Normal tissue (Liver cancer)
Detweiler01_E2_U937_mock_2hMacrophages (Stimulated immune*), Monocytes (Stimulated immune*), Hematologic samples and cell lines (Stimulated immune*), Hematologic cancer and cell line (Stimulated immune*)
Detweiler01_E2_U937_mock_2hbMacrophages (Stimulated immune*), Monocytes (Stimulated immune*), Hematologic samples and cell lines (Stimulated immune*), Hematologic cancer and cell line (Stimulated immune*)
Detweiler01_E2_U937_mock_4hbMacrophages (Stimulated immune*), Monocytes (Stimulated immune*), Hematologic samples and cell lines (Stimulated immune*), Hematologic cancer and cell line (Stimulated immune*)
Detweiler01_E2_U937_wild_type_30mMacrophages (Stimulated immune*), Monocytes (Stimulated immune*), Hematologic samples and cell lines (Stimulated immune*), Hematologic cancer and cell line (Stimulated immune*)
Detweiler01_E2_U937_wild_type_4hbMacrophages (Stimulated immune*), Monocytes (Stimulated immune*), Hematologic samples and cell lines (Stimulated immune*), Hematologic cancer and cell line (Stimulated immune*)
Detweiler01_E3_U937_mock_1hbMacrophages (Stimulated immune*), Monocytes (Stimulated immune*), Hematologic samples and cell lines (Stimulated immune*), Hematologic cancer and cell line (Stimulated immune*)
Garber01_11_00_AdenoStage T2 (Lung cancer), Cancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*)
Garber01_165_96_AdenoCancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Stage T1 (Lung cancer)
Garber01_219_97_normalLung tissue, cancer or cell line (Lung cancer*), Normal tissue (Lung cancer), Normal lung tissue (Lung cancer)
Garber01_220_97_SCCCancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Squamous cell lung cancer (Lung cancer)
Garber01_220_97_nodeCancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Squamous cell lung cancer (Lung cancer), Node in lung (Lung cancer)
Garber01_222_97_AdenoStage T2 (Lung cancer), Cancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*)
Garber01_226_97_AdenoCancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*)
Garber01_232_97_SCCCancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Squamous cell lung cancer (Lung cancer)
Garber01_237_97_AdenoCancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*)
Garber01_239_97_SCCCancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Squamous cell lung cancer (Lung cancer)
Garber01_314_99_normalLung tissue, cancer or cell line (Lung cancer*), Normal tissue (Lung cancer), Normal lung tissue (Lung cancer)
Garber01_319_00MT1_AdenoCancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Adenocarcinoma - metastasis (Lung cancer)
Garber01_69_96_AdenoCancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*)
Garber01_fetal_lungLung tissue, cancer or cell line (Lung cancer*)
Perou00_BC206B_AFBreast tissue, cancer or cell line (Breast cancer*), Breast cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal cancer or cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), After doxorubicin chemotherapy (Breast cancer), Adenocarcinoma (Breast cancer*), Breast cancer (Breast cancer*), Cancer (Breast cancer*), Breast tissue or cancer (Breast cancer*), Female hormonal cancer (Breast cancer*), Female hormonal tissue or cancer (Breast cancer*)
Perou00_BC808A_AF
Pomeroy02_Brain_Ncer_2CNS tissue, cancer or cell line (Neuro tumors*), Normal CNS tissue (Neuro tumors), Normal cerebellum tissue (Neuro tumors), Normal tissue (Neuro tumors)
Rosenwald01_CLL_53Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Chronic lymphocytic leukemia (B lymphoma), Leukemia (B lymphoma), Leukemia or leukemia cell line (B lymphoma)
Ross00_K562B_reproFast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Leukemia cell line (NCI60), Hematologic samples and cell lines (NCI60), Hematologic cancer and cell line (NCI60)
Ross00_RPMI_8226_CL7010_LEUKEMIAFast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Leukemia cell line (NCI60), Hematologic samples and cell lines (NCI60), Hematologic cancer and cell line (NCI60)
Sorlie01_BC208A_BEBreast tissue, cancer or cell line (Breast cancer*), Breast cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal cancer or cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), Adenocarcinoma (Breast cancer*), Breast cancer (Breast cancer*), Cancer (Breast cancer*), Breast tissue or cancer (Breast cancer*), Female hormonal cancer (Breast cancer*), Female hormonal tissue or cancer (Breast cancer*), Estogen receptor (ER) positive breast cancer (Breast cancer), Dead prognosis (Breast cancer), Grade 3 (Breast cancer), Breast cancer - (prognostic) relapse (Breast cancer), Mutated p53 tumor (Breast cancer)
Whitfield02_11_hr_Hela_Double_Thymidine_exp2Cell line (HeLa cell cycle*), Epithelial cell line (HeLa cell cycle*), HeLa cell line (HeLa cell cycle*), Cancer and cell line (HeLa cell cycle*)
Whitfield02_15_hr_Hela_Double_Thymidine_exp2Cell line (HeLa cell cycle*), Epithelial cell line (HeLa cell cycle*), HeLa cell line (HeLa cell cycle*), Cancer and cell line (HeLa cell cycle*)
Whitfield02_19_hr_Hela_Double_Thymidine_exp3Cell line (HeLa cell cycle*), Epithelial cell line (HeLa cell cycle*), HeLa cell line (HeLa cell cycle*), Cancer and cell line (HeLa cell cycle*)
Whitfield02_32_hr_Hela_Double_Thymidine_exp2Cell line (HeLa cell cycle*), Epithelial cell line (HeLa cell cycle*), HeLa cell line (HeLa cell cycle*), Cancer and cell line (HeLa cell cycle*)