PID Namespace Reference

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Detailed Description

The PID namespace defines standard identifiers for atoms, blocks, residues, and other resources provided with LoopTK.

Variables
static const string	C = "C"
static const string	C_ALPHA = "CA"
static const string	C_BETA = "CB"
static const string	O = "O"
static const string	N = "N"
static const string	S = "S"
static string	BACKBONE = "backbone"
static string	SIDECHAIN = "sidechain"
static const string	ALA = "ALA"
static const string	ARG = "ARG"
static const string	ASN = "ASN"
static const string	ASP = "ASP"
static const string	BACKBONE_RES = "BBR"
static const string	CB_RES = "CBR"
static const string	CYS = "CYS"
static const string	GLN = "GLN"
static const string	GLU = "GLU"
static const string	GLY = "GLY"
static const string	HIS = "HIS"
static const string	ILE = "ILE"
static const string	LEU = "LEU"
static const string	LYS = "LYS"
static const string	MET = "MET"
static const string	PHE = "PHE"
static const string	PRO = "PRO"
static const string	SER = "SER"
static const string	THR = "THR"
static const string	TRP = "TRP"
static const string	TYR = "TYR"
static const string	VAL = "VAL"
static const char	ALA_C = 'A'
static const char	ARG_C = 'R'
static const char	ASN_C = 'N'
static const char	ASP_C = 'D'
static const char	CYS_C = 'C'
static const char	GLN_C = 'Q'
static const char	GLU_C = 'E'
static const char	GLY_C = 'G'
static const char	HIS_C = 'H'
static const char	ILE_C = 'I'
static const char	LEU_C = 'L'
static const char	LYS_C = 'K'
static const char	MET_C = 'M'
static const char	PHE_C = 'F'
static const char	PRO_C = 'P'
static const char	SER_C = 'S'
static const char	THR_C = 'T'
static const char	TRP_C = 'W'
static const char	TYR_C = 'Y'
static const char	VAL_C = 'V'

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Variable Documentation

const string PID::ALA = "ALA" [static]

const char PID::ALA_C = 'A' [static]

const string PID::ARG = "ARG" [static]

const char PID::ARG_C = 'R' [static]

const string PID::ASN = "ASN" [static]

const char PID::ASN_C = 'N' [static]

const string PID::ASP = "ASP" [static]

const char PID::ASP_C = 'D' [static]

string PID::BACKBONE = "backbone" [static]

const string PID::BACKBONE_RES = "BBR" [static]

const string PID::C = "C" [static]

const string PID::C_ALPHA = "CA" [static]

const string PID::C_BETA = "CB" [static]

const string PID::CB_RES = "CBR" [static]

const string PID::CYS = "CYS" [static]

const char PID::CYS_C = 'C' [static]

const string PID::GLN = "GLN" [static]

const char PID::GLN_C = 'Q' [static]

const string PID::GLU = "GLU" [static]

const char PID::GLU_C = 'E' [static]

const string PID::GLY = "GLY" [static]

const char PID::GLY_C = 'G' [static]

const string PID::HIS = "HIS" [static]

const char PID::HIS_C = 'H' [static]

const string PID::ILE = "ILE" [static]

const char PID::ILE_C = 'I' [static]

const string PID::LEU = "LEU" [static]

const char PID::LEU_C = 'L' [static]

const string PID::LYS = "LYS" [static]

const char PID::LYS_C = 'K' [static]

const string PID::MET = "MET" [static]

const char PID::MET_C = 'M' [static]

const string PID::N = "N" [static]

const string PID::O = "O" [static]

const string PID::PHE = "PHE" [static]

const char PID::PHE_C = 'F' [static]

const string PID::PRO = "PRO" [static]

const char PID::PRO_C = 'P' [static]

const string PID::S = "S" [static]

const string PID::SER = "SER" [static]

const char PID::SER_C = 'S' [static]

string PID::SIDECHAIN = "sidechain" [static]

const string PID::THR = "THR" [static]

const char PID::THR_C = 'T' [static]

const string PID::TRP = "TRP" [static]

const char PID::TRP_C = 'W' [static]

const string PID::TYR = "TYR" [static]

const char PID::TYR_C = 'Y' [static]

const string PID::VAL = "VAL" [static]

const char PID::VAL_C = 'V' [static]

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